G226214


Basic Information

Item Value
gene id G226214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13206072 ~ 13207814 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258759
GGTGGAGTCGATTAAGTGGCATTTTCCCTCGCTCTTTCTCGACCGATTCTTAACTCTGTTTTGGGACGGTGGAATCTGAAGCGGCTAAGCTTCTCCTGATCCAACTCAAATCTGACTGCAGTGATATTGTGTTCAGAGCAGAGGCTACTGAACATATTCTGATCTTTCCAACAAAAAAAgggaaaaaataaaacaaagtctAAAACAATGAGAGATGCATTAAAAGCTGCACCCAAAACAATGCACAAGAAACTATTGACAATTGTTTTTCAACTAAAACACTGCAAAAATCTAATCTGTACAAATCTATCCAAACTGCTTTTCTGCACAAGGCCAGGTATCAGCTGTCTAACTATCTTCAAAAGATAAGTGTGAAGTCAAGGCACAGCTGCTCTCTGGGAGTTGTCTGCAGGGTGGGCTGGAAAATCTAACAATGCTCCAGGACACCGGAAATGGCTATTTAACTGTGTTTTAGTCTGATGCAACAAGCAGGCAAGAATATGGAAATGAGATCCTACTGTTATTCTTTTCTATTAACAtaaagggaggggaggggtttccTCGGGATTCCCGAAGCCAATCAGGACGCCAAGCCCATCCCTCCATTCCACTGACTGACCAATGGGAAACAGAGGAGGTGAGATCACCATGTTGTggcggagagagggggagagacgggggagcaTGCTGAACGAGGGCGAGTGTGGGATTGTGGAGAAGAGCAGAGGATTGTGTAAGTGAATCTAAATGGGCAGAAAAAATGAATAACTCTTTTGTagttaggagacagagagagttgatTGTGAGTCAGTAACAGAGCCGGTGGGAAGCTGCTTTATGATGTGTAAGGCCTGCTGACAAGCTTTTCATACTTCCTCCACTGACAATACAGTAGTAACCAGAAAAAAGGGACTTATGCATTGGGCATATCCCCTTTCCCTTTGTTGGGCTCTCTCTTATAGTCActctttcatcctctctcttcACACTGCAGGTTAAAGAGCTTGTCGCCTGCTCTCCTCCTCACTTGTTCCAGTGTTAATTCATTGTGTCTGGCCACTGGGTCAGAGGTAGATGAACGGACTAGACTgcccctactctccctccctccccctctccatcctccccctccctccgggTTGGCAGCATGCCAGGGGAGAGCCTTCCTGCCAACGTGGCACTGctgactctctccttctccctctgcttcctctcctccacctccatttCACCCCCTCTGTTCCAATCACtgttgtccctctttcttttctccccaaatccctctctctcctccatgtctttAATCATCCATCTACCCCCCTAGTGGTCCCTGTGTGTTGAACTGGTTGTGTCAATGTGTGTATTTCTGCACCATATTCTAGAAATGTCCGCTGAGGGACTGGAACTGTGATGTCTAGAGGCCCGTGATGTCATGATGATAATACACAGTATTTAATTGAATTCAAATGAAACTTGCCCCCAAACGAAGCCATGGGAGGTTTAACTTAGCTAATTAGACTGTACCTTTATCTATGAAGTTACATAAAAGCTATACGTTATGTAGTACTGCATTATGACAGTCAATAATCCAACACAGCCGTATACTCACTGGATCTCAGACATTTTGTCCAGCAGGGTCTCTGCCACGGCCTTCTCCTTCATCTCCATGGGGATACGATCAGTGGGGTAGTGAGACTCCACCTCCAGCAGCTCTGCCGCGTTAGGGGTCATACCCATCATCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258759 True 1743 lncRNA 0.43 1 13206072 13207814

Neighbor

gene id symbol gene type direction distance location
cxcr3.1 cxcr3b coding downstream 277008 12925454 ~ 12929064 (-)
LOC110503616 LOC106605556 coding downstream 323056 12880885 ~ 12883016 (-)
tlr21 LOC106605556 coding downstream 330384 12864942 ~ 12875688 (-)
LOC110509927 LOC106578751 coding downstream 345483 12856694 ~ 12860589 (-)
LOC110509869 NA coding downstream 442091 12761519 ~ 12763981 (-)
LOC110510146 mrpl17 coding upstream 131379 13339193 ~ 13341845 (-)
LOC110510138 trp-ii coding upstream 138295 13346109 ~ 13347872 (-)
LOC110503661 trp-i coding upstream 152068 13359882 ~ 13360962 (-)
LOC110510120 LOC106577461 coding upstream 169041 13376855 ~ 13378759 (-)
LOC110510106 LOC106577440 coding upstream 180595 13388409 ~ 13410671 (-)
G226215 arhgef1 non-coding downstream 940 13203344 ~ 13205132 (-)
G226210 NA non-coding downstream 11401 13190920 ~ 13194671 (-)
G226209 NA non-coding downstream 16912 13188789 ~ 13189160 (-)
G226208 NA non-coding downstream 17653 13187899 ~ 13188419 (-)
G226188 NA non-coding downstream 24263 13180988 ~ 13181809 (-)
G226221 NA non-coding upstream 8061 13215875 ~ 13216756 (-)
G226222 NA non-coding upstream 9061 13216875 ~ 13217150 (-)
G226201 NA non-coding upstream 9843 13217657 ~ 13217863 (-)
G226200 NA non-coding upstream 10388 13218202 ~ 13221973 (-)
G226223 NA non-coding upstream 15460 13223274 ~ 13223678 (-)
G226187 NA other downstream 25800 13177178 ~ 13180272 (-)
G226124 NA other downstream 138715 13066873 ~ 13067357 (-)
G225171 LOC106605713 other downstream 733012 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 748281 12454388 ~ 12457791 (-)
G225099 NA other downstream 865106 12336241 ~ 12340966 (-)
G226224 NA other upstream 16070 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 136260 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 718860 13909746 ~ 13927861 (-)
LOC110538195 LOC106578103 other upstream 791922 13995196 ~ 14023153 (-)
G227060 NA other upstream 1220979 14428793 ~ 14475166 (-)

Expression


Co-expression Network