XLOC_021878



Basic Information


Item Value
gene id XLOC_021878
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36585179 ~ 36585751 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044684
acatttagtaAATCAAAAACATAAGCACAAGACACTTTAGAAGCAGCAAATAAGAAATCAACAAAACTATACTGAACTTAAACATTacattaaagggaaagttcacctaaaaacgtgagtcttttctttctttctttctttctcttccaaagaagatattttgaagaaacctgtaaccattatcttccatagaaggaaaaacaaatactgtgaaaatcaatggttacaggtttcagctttcttcaaaatatattcttcagtgttcaacacaAATCTAAAgaaatcataaaggtttagaagcacgtgagggaaagtaaatagtgagtacattttcatttttgggtgaactatccctttaagtagttAACAATTGAAATATAAACAGCTTAAAATCTCTGAGTATTAAAGTTACATGAAGTTATTAACACTGAGGTTTCTTAACAAAGGCATTAGAATGGGTGTTGaaattatttgaatgtttttagcaACCCGACAACATAGGTGTGCTGCTTACCTCAAAGTAACAGTTTCCCTTTGATAAGGGGCGTGGAGCCACGTAGCAGCCAACTTCAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044684 True 573 lncRNA 0.33 1 36585179 36585751

Neighbor


gene id symbol gene type direction distance location
XLOC_021877 FO704757.1 coding upstream 93945 36491114 ~ 36491234 (+)
XLOC_021876 NA coding upstream 96550 36458347 ~ 36488629 (+)
XLOC_021875 NA coding upstream 164901 36418119 ~ 36420278 (+)
XLOC_021874 NA coding upstream 219262 36364905 ~ 36365917 (+)
XLOC_021873 copz1 coding upstream 231073 36340520 ~ 36354106 (+)
XLOC_021879 igfbp6b coding downstream 16233 36601984 ~ 36605837 (+)
XLOC_021880 pip4k2ca coding downstream 30966 36616717 ~ 36645135 (+)
XLOC_021881 gpr182 coding downstream 67625 36653376 ~ 36655640 (+)
XLOC_021882 tspan31 coding downstream 144962 36730713 ~ 36750301 (+)
XLOC_021883 march9 coding downstream 185842 36771593 ~ 36798620 (+)
XLOC_021872 NA non-coding upstream 265591 36319178 ~ 36319588 (+)
XLOC_021884 dre-mir-2191 non-coding downstream 204472 36790223 ~ 36790332 (+)
XLOC_021885 NA non-coding downstream 256881 36842632 ~ 36845980 (+)
XLOC_021886 CR926464.1 non-coding downstream 305978 36891729 ~ 36895369 (+)
XLOC_021887 NA non-coding downstream 440599 37026350 ~ 37038409 (+)
XLOC_021889 NA non-coding downstream 527536 37113287 ~ 37118114 (+)

Expression



Co-expression Network