Gene
RNA
| Item | Value |
|---|---|
| gene id | G226335 |
| gene name | LOC106577470 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13432325 ~ 13433104 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| B-cell lymphoma 3 protein homolog, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258900 | True | 780 | lncRNA | 0.34 | 1 | 13432325 | 13433104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510106 | LOC106577440 | coding | downstream | 21654 | 13388409 ~ 13410671 (-) |
| LOC110510120 | LOC106577461 | coding | downstream | 53566 | 13376855 ~ 13378759 (-) |
| LOC110503661 | trp-i | coding | downstream | 71363 | 13359882 ~ 13360962 (-) |
| LOC110510138 | trp-ii | coding | downstream | 84453 | 13346109 ~ 13347872 (-) |
| LOC110510146 | mrpl17 | coding | downstream | 90480 | 13339193 ~ 13341845 (-) |
| LOC110510167 | LOC106577478 | coding | upstream | 2492 | 13435596 ~ 13439420 (-) |
| LOC110510175 | LOC106577487 | coding | upstream | 7680 | 13440784 ~ 13459048 (-) |
| LOC110505114 | NA | coding | upstream | 30530 | 13463634 ~ 13474497 (-) |
| LOC110510190 | LOC106577499 | coding | upstream | 47015 | 13480119 ~ 13481941 (-) |
| LOC110510231 | LOC106577531 | coding | upstream | 125389 | 13558493 ~ 13678675 (-) |
| G226334 | NA | non-coding | downstream | 2302 | 13429806 ~ 13430023 (-) |
| G226326 | NA | non-coding | downstream | 2572 | 13415229 ~ 13429753 (-) |
| G226325 | NA | non-coding | downstream | 17201 | 13414228 ~ 13415124 (-) |
| G226314 | tryp | non-coding | downstream | 45182 | 13381106 ~ 13387143 (-) |
| G226206 | NA | non-coding | downstream | 89238 | 13342756 ~ 13343087 (-) |
| G226361 | NA | non-coding | upstream | 28454 | 13461558 ~ 13461866 (-) |
| G226371 | NA | non-coding | upstream | 53902 | 13487006 ~ 13487717 (-) |
| G226372 | NA | non-coding | upstream | 54950 | 13488054 ~ 13488306 (-) |
| G226374 | NA | non-coding | upstream | 59047 | 13492151 ~ 13492412 (-) |
| G226294 | LOC100136012 | other | downstream | 87950 | 13344074 ~ 13344375 (-) |
| G226224 | NA | other | downstream | 207810 | 13223884 ~ 13224515 (-) |
| G226187 | NA | other | downstream | 252053 | 13177178 ~ 13180272 (-) |
| G226124 | NA | other | downstream | 364968 | 13066873 ~ 13067357 (-) |
| G225171 | LOC106605713 | other | downstream | 959265 | 12472299 ~ 12473060 (-) |
| wu:fe05a04 | LOC106578221 | other | upstream | 493570 | 13909746 ~ 13927861 (-) |
| LOC110538195 | LOC106578103 | other | upstream | 566632 | 13995196 ~ 14023153 (-) |
| G227060 | NA | other | upstream | 995689 | 14428793 ~ 14475166 (-) |
| psenen | LOC106577931 | other | upstream | 1090076 | 14519197 ~ 14524902 (-) |
| LOC110503689 | tm149 | other | upstream | 1165685 | 14598789 ~ 14638314 (-) |
