G226340


Basic Information

Item Value
gene id G226340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13517724 ~ 13587278 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258905
attttttttttTTTTATCACAAAGGTATCTTTATTGTTCAGCTCATTGTGTTCCAGGTTATTAAAGCAAGCCATAACAATTACACAGAGATGATGTCAGTCTCTTCACAGAGGTCGAATATAACCTTGGTGTCTGTCGGCACAACGCAAGTGTCAGAGTCACAGCAACCGCGTCACCAGACAAGACAGCGCAAGAAGCGtagtggtggggggagggggagctCTTAGACAGGCAGGGTCAGAGGTGTACAGGCTTACTACTGCTTGGGGAAGGTCTCATCGATCTTGGCCTTCATCTTGTCAAACTGCTCAGTGAACCAGGTCtgGTTTTGGTGATGAACTCGCTGTCCCCAATCTTTTCAACTATGTCCTTGGTCTTGACGGTCAGGTCCTCACTTAGGTCCTTCATCTGATTGCCGAAGGTGGTGAAATGCTCCTCAATGGTCTTCTCAGCCTCCTGAgcctctgtGTGTGTGCGGCGAACACAAGCATCAACACGGCAATGGCAATGGACAGTTTCATCTTGACTGTTGGCTGCAAGGGAAGGAAATTTAGCAACAAAACACCCTGCTTTTAATATCCTCCATCATAAAAAGGTTTGCATGATGAGTTAGTTATGAGTTCAAACAAAATTGAAGCGTTACGCTGTCAGGGCTTCACCAGGAGCTGTACTAAACAAGTGAAAATGATCAAAAGCTGTTATGTGTTATAGCGGAAACCGTTCAGCTGCATGTGTGGCTAGTGAAAGAGCGCTCCCGTGCGGTCAGCACAGTGGACAGCTCCCTTTGCGTTCTCTAGCCATCACACATCTTCGATTGGTGGCTTCACATTAGCAAGAAAAAAAAACTTACATTTTACATGTTAGATTAAACTTGACCTACATTTGATTAAATTAGTAGACTAACATAAccatttattataataatatctGTCTTCAGCATTGGAATGGCGCTCAGAAACAGAAGATAGGCTGGATGTCTTTCCCACTGTATAACTACACCTAGATGTCGGCACAATACCACAAATTGATTTTGAGATACTGGTATAGATTTATGGAAAGTTTGGggtataaaataaacaaatacattgGCGACATTCTCGTGCATTTATTTTTAGTAAATAAACTGATGAACAAAAGTCTCAGATATACCGGCCTATGTGTTTGCTCAGATAAGAGCAAACACATGCAAAGATAGACATTTGAAGTAAAAACAATGAAAGGAAGTCTCCAGAAATGCTAGTGATAAGTAGGTTAATCTTACCTGTTTTCTGTCTCAGAGAGAAAA

Function

NR:

description
apolipoprotein C-I-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258905 True 1285 lncRNA 0.42 4 13517724 13587278

Neighbor

gene id symbol gene type direction distance location
LOC110510190 LOC106577499 coding downstream 35783 13480119 ~ 13481941 (-)
LOC110505114 NA coding downstream 43227 13463634 ~ 13474497 (-)
LOC110510175 LOC106577487 coding downstream 58676 13440784 ~ 13459048 (-)
LOC110510167 LOC106577478 coding downstream 78304 13435596 ~ 13439420 (-)
LOC110510106 LOC106577440 coding downstream 107053 13388409 ~ 13410671 (-)
rs19 LOC100689943 coding upstream 130966 13718244 ~ 13723892 (-)
LOC110510240 LOC106577561 coding upstream 156255 13743533 ~ 13883559 (-)
LOC110510354 LOC106578237 coding upstream 299270 13886548 ~ 13902511 (-)
LOC110510306 LOC106578229 coding upstream 319067 13906345 ~ 13909374 (-)
wu:fe05a04 LOC106578221 coding upstream 322468 13909746 ~ 13927861 (-)
G226355 NA non-coding downstream 23471 13493442 ~ 13494253 (-)
G226375 NA non-coding downstream 24631 13492685 ~ 13493093 (-)
G226374 NA non-coding downstream 25312 13492151 ~ 13492412 (-)
G226372 NA non-coding downstream 29418 13488054 ~ 13488306 (-)
G226371 NA non-coding downstream 30007 13487006 ~ 13487717 (-)
G226422 NA non-coding upstream 33277 13620555 ~ 13623391 (-)
G226429 NA non-coding upstream 51527 13638805 ~ 13639774 (-)
G226446 NA non-coding upstream 104147 13691425 ~ 13691641 (-)
G226447 NA non-coding upstream 105678 13692956 ~ 13693168 (-)
G226484 NA non-coding upstream 160861 13748139 ~ 13811352 (-)
G226294 LOC100136012 other downstream 173349 13344074 ~ 13344375 (-)
G226224 NA other downstream 293209 13223884 ~ 13224515 (-)
G226187 NA other downstream 337452 13177178 ~ 13180272 (-)
G226124 NA other downstream 450367 13066873 ~ 13067357 (-)
G225171 LOC106605713 other downstream 1044664 12472299 ~ 12473060 (-)
LOC110538195 LOC106578103 other upstream 412458 13995196 ~ 14023153 (-)
G227060 NA other upstream 841515 14428793 ~ 14475166 (-)
psenen LOC106577931 other upstream 935902 14519197 ~ 14524902 (-)
LOC110503689 tm149 other upstream 1011511 14598789 ~ 14638314 (-)

Expression


Co-expression Network