G225671


Basic Information

Item Value
gene id G225671
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13545873 ~ 13546978 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258116
caggTAGAAAAGAACCACAGACTAAACACAGAGTCTAATACAGAGACCAAGACATGATGAAGCTGCTACTGCTGGCCTTGGCTTTGGGGTGTGCAGCGGCTGTTCCAGTGGAGGAGAATGGAGCGTTGTTGCAGGAAGTTTGCCAACCCCACTCCAGACCCCGGCAGGTCTACACTAAGGGGGGCTGGTATGGGAAGGGAAGGTGCAGTGGTGCCCTCATCAATGAGTGTTGGGTGCTTACCGCTTGGAACTTTacctggCTACACTatggttcctctcctctccactccactccactccactcctctcctcctcagacctggCTACACTatggttcctctcctctcctctccactccactccactccactcctc

Function

NR:

description
trypsinogen-like protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258116 True 375 TUCP 0.55 3 13545873 13546978

Neighbor

gene id symbol gene type direction distance location
LOC110510221 LOC106577525 coding upstream 4547 13539000 ~ 13541326 (+)
apoa2 apoa2 coding upstream 13187 13529662 ~ 13532686 (+)
LOC110510206 LOC106577511 coding upstream 25840 13517648 ~ 13520035 (+)
apoe LOC106605689 coding upstream 33977 13504087 ~ 13511896 (+)
LOC110510198 LOC106577505 coding upstream 59588 13484307 ~ 13486285 (+)
LOC110503682 trp-iii coding downstream 454174 14001152 ~ 14003950 (+)
LOC110510707 LOC106593417 coding downstream 526422 14073400 ~ 14075519 (+)
LOC110510523 LOC106573797 coding downstream 593308 14140286 ~ 14152666 (+)
LOC110510755 LOC106561134 coding downstream 657929 14204907 ~ 14219816 (+)
LOC110510617 LOC106578046 coding downstream 679847 14226825 ~ 14268614 (+)
G225650 NA non-coding upstream 52467 13493161 ~ 13493406 (+)
G225645 LOC106577505 non-coding upstream 63617 13480121 ~ 13482256 (+)
G225640 NA non-coding upstream 65764 13479898 ~ 13480109 (+)
G225642 NA non-coding upstream 71340 13474247 ~ 13474533 (+)
G225631 NA non-coding upstream 79195 13466213 ~ 13466678 (+)
G225714 NA non-coding downstream 110757 13657735 ~ 13658053 (+)
G225727 NA non-coding downstream 144852 13691830 ~ 13692056 (+)
G225729 NA non-coding downstream 146859 13693837 ~ 13745225 (+)
G225749 LOC102796463 non-coding downstream 171262 13718240 ~ 13723979 (+)
G225731 LOC106577561 non-coding downstream 204788 13751766 ~ 13759267 (+)
G225651 NA other upstream 51438 13493885 ~ 13494435 (+)
G225649 NA other upstream 53893 13491571 ~ 13491980 (+)
LOC110510042 LOC106578847 other upstream 494920 13047440 ~ 13074579 (+)
LOC110509979 LOC106574911 other upstream 543657 12985236 ~ 13022032 (+)
G225672 NA other downstream 3120 13550098 ~ 13550582 (+)
G225710 NA other downstream 98591 13645569 ~ 13646011 (+)
G225859 LOC106605594 other downstream 443258 13990236 ~ 13992021 (+)
G225920 NA other downstream 499608 14046586 ~ 14046848 (+)

Expression


Co-expression Network