G225672


Basic Information

Item Value
gene id G225672
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13550098 ~ 13550582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258117
GCCAGATATGTGCAGCACGGGCCATAAGCACAAGGTCCCTCTCATAGCCTGGCAATGGTGAAGCTGGCAGAGCCTGCCCGGTTCACTCAGCATGTCATGCCCGTAGCCATACCCACACGCTGCACTCAGCTCCACGAGAAGTGTCTGGTCAGCGGCTGGGGCTCCACCATACCGGGACAGGACGAGCCCAATCTAATCCTGAAGTGTGAAACACAGCGGGTCGTTGATGACAAGATGTGCCAGATAGCCTTTCCCCTTTATTGGATTGAACACACATTCTGTGCTAAAACCATCATCTCGACCGACAACTGCCTGGTCAGCACATCAACAACACAGTGCTTTGCttacatttatatatttatatttatatctcTG

Function

NR:

description
trypsinogen-like protein 3

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU258117 True 375 TUCP 0.59 2 13550098 13550582

Neighbor

gene id symbol gene type direction distance location
LOC110510221 LOC106577525 coding upstream 8772 13539000 ~ 13541326 (+)
apoa2 apoa2 coding upstream 17412 13529662 ~ 13532686 (+)
LOC110510206 LOC106577511 coding upstream 30065 13517648 ~ 13520035 (+)
apoe LOC106605689 coding upstream 38202 13504087 ~ 13511896 (+)
LOC110510198 LOC106577505 coding upstream 63813 13484307 ~ 13486285 (+)
LOC110503682 trp-iii coding downstream 450570 14001152 ~ 14003950 (+)
LOC110510707 LOC106593417 coding downstream 522818 14073400 ~ 14075519 (+)
LOC110510523 LOC106573797 coding downstream 589704 14140286 ~ 14152666 (+)
LOC110510755 LOC106561134 coding downstream 654325 14204907 ~ 14219816 (+)
LOC110510617 LOC106578046 coding downstream 676243 14226825 ~ 14268614 (+)
G225650 NA non-coding upstream 56692 13493161 ~ 13493406 (+)
G225645 LOC106577505 non-coding upstream 67842 13480121 ~ 13482256 (+)
G225640 NA non-coding upstream 69989 13479898 ~ 13480109 (+)
G225642 NA non-coding upstream 75565 13474247 ~ 13474533 (+)
G225631 NA non-coding upstream 83420 13466213 ~ 13466678 (+)
G225714 NA non-coding downstream 107153 13657735 ~ 13658053 (+)
G225727 NA non-coding downstream 141248 13691830 ~ 13692056 (+)
G225729 NA non-coding downstream 143255 13693837 ~ 13745225 (+)
G225749 LOC102796463 non-coding downstream 167658 13718240 ~ 13723979 (+)
G225731 LOC106577561 non-coding downstream 201184 13751766 ~ 13759267 (+)
G225671 NA other upstream 3120 13545873 ~ 13546978 (+)
G225651 NA other upstream 55663 13493885 ~ 13494435 (+)
G225649 NA other upstream 58118 13491571 ~ 13491980 (+)
LOC110510042 LOC106578847 other upstream 499145 13047440 ~ 13074579 (+)
G225710 NA other downstream 94987 13645569 ~ 13646011 (+)
G225859 LOC106605594 other downstream 439654 13990236 ~ 13992021 (+)
G225920 NA other downstream 496004 14046586 ~ 14046848 (+)
LOC110510822 smg9 other downstream 727850 14278350 ~ 14284963 (+)

Expression


Co-expression Network