Gene
RNA
| Item | Value |
|---|---|
| gene id | G225714 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13657735 ~ 13658053 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258166 | True | 204 | lncRNA | 0.47 | 2 | 13657735 | 13658053 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510221 | LOC106577525 | coding | upstream | 116409 | 13539000 ~ 13541326 (+) |
| apoa2 | apoa2 | coding | upstream | 125049 | 13529662 ~ 13532686 (+) |
| LOC110510206 | LOC106577511 | coding | upstream | 137702 | 13517648 ~ 13520035 (+) |
| apoe | LOC106605689 | coding | upstream | 145839 | 13504087 ~ 13511896 (+) |
| LOC110510198 | LOC106577505 | coding | upstream | 171450 | 13484307 ~ 13486285 (+) |
| LOC110503682 | trp-iii | coding | downstream | 343099 | 14001152 ~ 14003950 (+) |
| LOC110510707 | LOC106593417 | coding | downstream | 415347 | 14073400 ~ 14075519 (+) |
| LOC110510523 | LOC106573797 | coding | downstream | 482233 | 14140286 ~ 14152666 (+) |
| LOC110510755 | LOC106561134 | coding | downstream | 546854 | 14204907 ~ 14219816 (+) |
| LOC110510617 | LOC106578046 | coding | downstream | 568772 | 14226825 ~ 14268614 (+) |
| G225650 | NA | non-coding | upstream | 164329 | 13493161 ~ 13493406 (+) |
| G225645 | LOC106577505 | non-coding | upstream | 175479 | 13480121 ~ 13482256 (+) |
| G225640 | NA | non-coding | upstream | 177626 | 13479898 ~ 13480109 (+) |
| G225642 | NA | non-coding | upstream | 183202 | 13474247 ~ 13474533 (+) |
| G225631 | NA | non-coding | upstream | 191057 | 13466213 ~ 13466678 (+) |
| G225727 | NA | non-coding | downstream | 33777 | 13691830 ~ 13692056 (+) |
| G225729 | NA | non-coding | downstream | 35784 | 13693837 ~ 13745225 (+) |
| G225749 | LOC102796463 | non-coding | downstream | 60187 | 13718240 ~ 13723979 (+) |
| G225731 | LOC106577561 | non-coding | downstream | 93713 | 13751766 ~ 13759267 (+) |
| G225730 | cadm4 | non-coding | downstream | 103138 | 13761191 ~ 13883537 (+) |
| G225710 | NA | other | upstream | 11724 | 13645569 ~ 13646011 (+) |
| G225672 | NA | other | upstream | 107153 | 13550098 ~ 13550582 (+) |
| G225671 | NA | other | upstream | 110757 | 13545873 ~ 13546978 (+) |
| G225651 | NA | other | upstream | 163300 | 13493885 ~ 13494435 (+) |
| G225859 | LOC106605594 | other | downstream | 332183 | 13990236 ~ 13992021 (+) |
| G225920 | NA | other | downstream | 388533 | 14046586 ~ 14046848 (+) |
| LOC110510822 | smg9 | other | downstream | 620379 | 14278350 ~ 14284963 (+) |
| G226807 | LOC106578340 | other | downstream | 731424 | 14389198 ~ 14390428 (+) |
