G225882


Basic Information

Item Value
gene id G225882
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13960135 ~ 13960360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258393
gtttgggaaccactgctgtagagCAACGGTCACCAACCGATTGTCATCGACtggtcgatcaccaaacatttctgtacaaaaacaacgataaagccttgtGTTAACATCCAAGAACCGGGAAGTGCACCTAGAACTTTGCATAACTGGCAGgtccagagagcaaatcaagtgcacctatagacctaccgctggccaatcagatagctcagatcGGCATGTCTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258393 True 226 lncRNA 0.50 1 13960135 13960360

Neighbor

gene id symbol gene type direction distance location
LOC110510221 LOC106577525 coding upstream 418809 13539000 ~ 13541326 (+)
apoa2 apoa2 coding upstream 427449 13529662 ~ 13532686 (+)
LOC110510206 LOC106577511 coding upstream 440102 13517648 ~ 13520035 (+)
apoe LOC106605689 coding upstream 448239 13504087 ~ 13511896 (+)
LOC110510198 LOC106577505 coding upstream 473850 13484307 ~ 13486285 (+)
LOC110503682 trp-iii coding downstream 40792 14001152 ~ 14003950 (+)
LOC110510707 LOC106593417 coding downstream 113040 14073400 ~ 14075519 (+)
LOC110510523 LOC106573797 coding downstream 179926 14140286 ~ 14152666 (+)
LOC110510755 LOC106561134 coding downstream 244547 14204907 ~ 14219816 (+)
LOC110510617 LOC106578046 coding downstream 266465 14226825 ~ 14268614 (+)
G225841 NA non-coding upstream 57557 13886549 ~ 13902578 (+)
G225730 cadm4 non-coding upstream 76598 13761191 ~ 13883537 (+)
G225795 NA non-coding upstream 130960 13828730 ~ 13829175 (+)
G225773 NA non-coding upstream 175109 13780992 ~ 13785026 (+)
G225766 NA non-coding upstream 191861 13767493 ~ 13768274 (+)
G225884 NA non-coding downstream 2105 13962465 ~ 13963863 (+)
G225897 NA non-coding downstream 23428 13983788 ~ 13984018 (+)
G225857 NA non-coding downstream 26309 13986669 ~ 13988035 (+)
G225855 LOC106578138 non-coding downstream 32840 13993200 ~ 13996338 (+)
G225856 LOC106605595 non-coding downstream 36208 13996568 ~ 13996976 (+)
G225710 NA other upstream 314124 13645569 ~ 13646011 (+)
G225672 NA other upstream 409553 13550098 ~ 13550582 (+)
G225671 NA other upstream 413157 13545873 ~ 13546978 (+)
G225651 NA other upstream 465700 13493885 ~ 13494435 (+)
G225859 LOC106605594 other downstream 29876 13990236 ~ 13992021 (+)
G225920 NA other downstream 86226 14046586 ~ 14046848 (+)
LOC110510822 smg9 other downstream 318072 14278350 ~ 14284963 (+)
G226807 LOC106578340 other downstream 429117 14389198 ~ 14390428 (+)

Expression


Co-expression Network