XLOC_021885



Basic Information


Item Value
gene id XLOC_021885
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36842632 ~ 36845980 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044876
CTGGATGGTAGGAGGGCACACAATGAGGGTTTGCTGGAAGGGCTCTGTCTGGGCACACAGCTGAGTAGGGCGAGCCTGCAGCGGCACACTCTGCTGAGCCAAGCCTGGGATATTTATAGTGGCCTGCTGGTACAGACCAGGCTGGTAGTTCAGTAAAGGAACGTTGCTGCTAAGAGACAGGGACTGGCCCCCTGTGGAGGCCACCTGGCTGTGCTGATTGAGTTGACTGCTGAACGTGACGGTGAGGTTGGCGGCTGCGCTCGGGCCATTGTGGCTGCTGAATAGGTTTTTGTTGTTGTCGAAGGCGGTGCACCTGCGCTTGCAGATATCCATGTTTTGGAAGCAGGATTTCACACTGTGCAAGAAAGGGTGGTCAGTGAGATTTAAAACAGAGAGAGGTGTGGAAACTCCTTCAGGATTATATCAGGGCTTACTGAGAGCTGTGTGGGAAGTGAAGCAGGTGGGTCATCGTCACAAACGGGTGGTTGAGGGTCTTGGTGGGTGTTATTCTCTTGTCCGCATCTAATGTTAGCATTTTCTTTAGCAGGTCGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044876 True 552 lncRNA 0.53 2 36842632 36845980

Neighbor


gene id symbol gene type direction distance location
XLOC_021883 march9 coding upstream 44012 36771593 ~ 36798620 (+)
XLOC_021884 dre-mir-2191 coding upstream 52300 36790223 ~ 36790332 (+)
XLOC_021882 tspan31 coding upstream 92331 36730713 ~ 36750301 (+)
XLOC_021881 gpr182 coding upstream 186992 36653376 ~ 36655640 (+)
XLOC_021880 pip4k2ca coding upstream 197497 36616717 ~ 36645135 (+)
XLOC_021886 CR926464.1 coding downstream 45749 36891729 ~ 36895369 (+)
XLOC_021887 NA coding downstream 180370 37026350 ~ 37038409 (+)
XLOC_021888 cptp coding downstream 240179 37086159 ~ 37094205 (+)
XLOC_021889 NA coding downstream 267307 37113287 ~ 37118114 (+)
XLOC_021890 vwa5b1 coding downstream 339267 37185247 ~ 37198890 (+)
XLOC_021878 NA non-coding upstream 256881 36585179 ~ 36585751 (+)
XLOC_021877 FO704757.1 non-coding upstream 351398 36491114 ~ 36491234 (+)
XLOC_021876 NA non-coding upstream 354003 36458347 ~ 36488629 (+)
XLOC_021875 NA non-coding upstream 422354 36418119 ~ 36420278 (+)
XLOC_021891 NA non-coding downstream 381201 37227181 ~ 37433229 (+)
XLOC_021892 NA non-coding downstream 440434 37286414 ~ 37287626 (+)

Expression



Co-expression Network