Gene
RNA
| Item | Value |
|---|---|
| gene id | G225856 |
| gene name | LOC106605595 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13996568 ~ 13996976 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative mediator of RNA polymerase II transcription subunit 12 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258346 | True | 409 | lncRNA | 0.47 | 1 | 13996568 | 13996976 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510221 | LOC106577525 | coding | upstream | 455242 | 13539000 ~ 13541326 (+) |
| apoa2 | apoa2 | coding | upstream | 463882 | 13529662 ~ 13532686 (+) |
| LOC110510206 | LOC106577511 | coding | upstream | 476535 | 13517648 ~ 13520035 (+) |
| apoe | LOC106605689 | coding | upstream | 484672 | 13504087 ~ 13511896 (+) |
| LOC110510198 | LOC106577505 | coding | upstream | 510283 | 13484307 ~ 13486285 (+) |
| LOC110503682 | trp-iii | coding | downstream | 4176 | 14001152 ~ 14003950 (+) |
| LOC110510707 | LOC106593417 | coding | downstream | 76424 | 14073400 ~ 14075519 (+) |
| LOC110510523 | LOC106573797 | coding | downstream | 143310 | 14140286 ~ 14152666 (+) |
| LOC110510755 | LOC106561134 | coding | downstream | 207931 | 14204907 ~ 14219816 (+) |
| LOC110510617 | LOC106578046 | coding | downstream | 229849 | 14226825 ~ 14268614 (+) |
| G225855 | LOC106578138 | non-coding | upstream | 230 | 13993200 ~ 13996338 (+) |
| G225857 | NA | non-coding | upstream | 8533 | 13986669 ~ 13988035 (+) |
| G225897 | NA | non-coding | upstream | 12550 | 13983788 ~ 13984018 (+) |
| G225884 | NA | non-coding | upstream | 32705 | 13962465 ~ 13963863 (+) |
| G225882 | NA | non-coding | upstream | 36208 | 13960135 ~ 13960360 (+) |
| G225858 | si:ch211-261d7.3 | non-coding | downstream | 141 | 13997117 ~ 13997877 (+) |
| G225919 | NA | non-coding | downstream | 49320 | 14046296 ~ 14046583 (+) |
| G225921 | LOC106595663 | non-coding | downstream | 50985 | 14047961 ~ 14053086 (+) |
| G225931 | NA | non-coding | downstream | 72666 | 14069642 ~ 14126977 (+) |
| G225958 | NA | non-coding | downstream | 124759 | 14121735 ~ 14128708 (+) |
| G225859 | LOC106605594 | other | upstream | 4547 | 13990236 ~ 13992021 (+) |
| G225710 | NA | other | upstream | 350557 | 13645569 ~ 13646011 (+) |
| G225672 | NA | other | upstream | 445986 | 13550098 ~ 13550582 (+) |
| G225671 | NA | other | upstream | 449590 | 13545873 ~ 13546978 (+) |
| G225920 | NA | other | downstream | 49610 | 14046586 ~ 14046848 (+) |
| LOC110510822 | smg9 | other | downstream | 281456 | 14278350 ~ 14284963 (+) |
| G226807 | LOC106578340 | other | downstream | 392501 | 14389198 ~ 14390428 (+) |
| G226791 | NA | other | downstream | 411896 | 14408872 ~ 14410081 (+) |
