G225931


Basic Information

Item Value
gene id G225931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14069642 ~ 14126977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258455
gggaaatgtagtattggtgcgtgtaaaagatctgcgggctgccggcttgctgcgggccggttctaataataaatcaagatcatcccaggggccgtaaaaaaccttcttgcgggccggatgtggcccgcgggccttgactctgacatatgtGCCATATCGGGTACCCGAGGCTCGACAGGCCGCGATTAGAGCAGAGACGGAGAAAATGTTGACAGCTGGAGTGATCGAAGAGTCACATAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU258455 True 240 lncRNA 0.38 2 14069642 14126977

Neighbor

gene id symbol gene type direction distance location
LOC110503682 trp-iii coding upstream 65692 14001152 ~ 14003950 (+)
LOC110510221 LOC106577525 coding upstream 528316 13539000 ~ 13541326 (+)
apoa2 apoa2 coding upstream 536956 13529662 ~ 13532686 (+)
LOC110510206 LOC106577511 coding upstream 549609 13517648 ~ 13520035 (+)
apoe LOC106605689 coding upstream 557746 13504087 ~ 13511896 (+)
LOC110510523 LOC106573797 coding downstream 13309 14140286 ~ 14152666 (+)
LOC110510755 LOC106561134 coding downstream 77930 14204907 ~ 14219816 (+)
LOC110510617 LOC106578046 coding downstream 99848 14226825 ~ 14268614 (+)
LOC110510822 smg9 coding downstream 151373 14278350 ~ 14284963 (+)
LOC110510848 NA coding downstream 188620 14315597 ~ 14320723 (+)
G225921 LOC106595663 non-coding upstream 16556 14047961 ~ 14053086 (+)
G225919 NA non-coding upstream 23059 14046296 ~ 14046583 (+)
G225858 si:ch211-261d7.3 non-coding upstream 71765 13997117 ~ 13997877 (+)
G225856 LOC106605595 non-coding upstream 72666 13996568 ~ 13996976 (+)
G225855 LOC106578138 non-coding upstream 73304 13993200 ~ 13996338 (+)
G225962 NA non-coding downstream 4557 14131534 ~ 14131772 (+)
G225965 NA non-coding downstream 7938 14134915 ~ 14135217 (+)
G225992 NA non-coding downstream 70615 14197592 ~ 14197866 (+)
G225995 NA non-coding downstream 72833 14199810 ~ 14200045 (+)
G225920 NA other upstream 22794 14046586 ~ 14046848 (+)
G225859 LOC106605594 other upstream 77621 13990236 ~ 13992021 (+)
G225710 NA other upstream 423631 13645569 ~ 13646011 (+)
G225672 NA other upstream 519060 13550098 ~ 13550582 (+)
G226807 LOC106578340 other downstream 262500 14389198 ~ 14390428 (+)
G226791 NA other downstream 281895 14408872 ~ 14410081 (+)
G226941 NA other downstream 576624 14703601 ~ 14703975 (+)
LOC118944476 LOC106605624 other downstream 815173 14942150 ~ 14984145 (+)

Expression


Co-expression Network