G225962


Basic Information

Item Value
gene id G225962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14131534 ~ 14131772 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258488
gagaggtgctgggtgccggtggaggacatcTTGGACCCATCTCTGCTGGGTGAGTTCCACCGCCTCCATCctgatcgccctgcgcctcgccctccgggtcgtcctcgaggccggcgTCGGcacgctgcgggagccgcgcgtcaggggtgAGGTACAGTcatgacttccaccgaaggtggctcctctccccgTTCGAGCGGCACTCTGCGGTcttcgtcgccggtctactagctgccacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258488 True 239 lncRNA 0.68 1 14131534 14131772

Neighbor

gene id symbol gene type direction distance location
LOC110510707 LOC106593417 coding upstream 56015 14073400 ~ 14075519 (+)
LOC110503682 trp-iii coding upstream 127584 14001152 ~ 14003950 (+)
LOC110510221 LOC106577525 coding upstream 590208 13539000 ~ 13541326 (+)
apoa2 apoa2 coding upstream 598848 13529662 ~ 13532686 (+)
LOC110510206 LOC106577511 coding upstream 611501 13517648 ~ 13520035 (+)
LOC110510523 LOC106573797 coding downstream 8514 14140286 ~ 14152666 (+)
LOC110510755 LOC106561134 coding downstream 73135 14204907 ~ 14219816 (+)
LOC110510617 LOC106578046 coding downstream 95053 14226825 ~ 14268614 (+)
LOC110510822 smg9 coding downstream 146578 14278350 ~ 14284963 (+)
LOC110510848 NA coding downstream 183825 14315597 ~ 14320723 (+)
G225958 NA non-coding upstream 2826 14121735 ~ 14128708 (+)
G225931 NA non-coding upstream 4557 14069642 ~ 14126977 (+)
G225921 LOC106595663 non-coding upstream 78448 14047961 ~ 14053086 (+)
G225919 NA non-coding upstream 84951 14046296 ~ 14046583 (+)
G225858 si:ch211-261d7.3 non-coding upstream 133657 13997117 ~ 13997877 (+)
G225965 NA non-coding downstream 3143 14134915 ~ 14135217 (+)
G225992 NA non-coding downstream 65820 14197592 ~ 14197866 (+)
G225995 NA non-coding downstream 68038 14199810 ~ 14200045 (+)
G226701 NA non-coding downstream 99731 14231503 ~ 14231749 (+)
G225920 NA other upstream 84686 14046586 ~ 14046848 (+)
G225859 LOC106605594 other upstream 139513 13990236 ~ 13992021 (+)
G225710 NA other upstream 485523 13645569 ~ 13646011 (+)
G225672 NA other upstream 580952 13550098 ~ 13550582 (+)
G226807 LOC106578340 other downstream 257705 14389198 ~ 14390428 (+)
G226791 NA other downstream 277100 14408872 ~ 14410081 (+)
G226941 NA other downstream 571829 14703601 ~ 14703975 (+)
LOC118944476 LOC106605624 other downstream 810378 14942150 ~ 14984145 (+)

Expression


Co-expression Network