G226679


Basic Information

Item Value
gene id G226679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14219212 ~ 14219780 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259296
TgacaagacagagagatgatatCAGTATAAAAACTGACACAGCTTAACATAAACATTAGCATGGACAATTGTCTATCAGATACAGTGAGAATCGTGTGAATACAGAGTACTGCTCTGTACTCAGAACAAGTGAAAAGGCAATTCATAACATTGAATAAATATACATCCAGAGCAGACCAATGGGCCAATAAAAGCCCGTATAAAAATAGAGAATATAGGTATTAAGTTATGAAAACATCTATTCATATTAAAGCTAAACATTTGGATCACCCAAGCATTTTTAATTTCCAATATATAAAACTATTTACAGTAAATCCATGGAAGACTGATTATACAGGAGTGAATACAGTTCAGTGCAGACCCATTCTATCCCAGCAATcactcacatttatttataaagccctttttacatcagcagatgtcacaaagtgctatacagaaacacagcctgaaACCCTTAACAGCAATCAATGCAGCacgaacctaggaagaaacctagagaggaaccaggctgtgccgggtggagattataagagtacatcaCAATTGTGATGTTCTTCAATCTGGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259296 True 569 lncRNA 0.37 1 14219212 14219780

Neighbor

gene id symbol gene type direction distance location
LOC110510806 LOC106578077 coding downstream 26906 14148137 ~ 14192306 (-)
fpr1 LOC106605601 coding downstream 116931 14099401 ~ 14102281 (-)
LOC110510492 LOC106578091 coding downstream 123108 14084118 ~ 14096104 (-)
LOC110510454 LOC106595663 coding downstream 140227 14026102 ~ 14078985 (-)
LOC110538195 LOC106578103 coding downstream 196059 13995196 ~ 14023153 (-)
si:dkey-79d12.4 LOC106605603 coding upstream 50873 14270653 ~ 14279142 (-)
LOC110510581 LOC106578340 coding upstream 169418 14389198 ~ 14397283 (-)
LOC110510742 LOC106578317 coding upstream 255902 14475682 ~ 14481655 (-)
antol lin37 coding upstream 288626 14508406 ~ 14511632 (-)
psenen LOC106577931 coding upstream 299417 14519197 ~ 14524902 (-)
G226651 NA non-coding downstream 83487 14135495 ~ 14135725 (-)
G226649 NA non-coding downstream 84834 14134084 ~ 14134378 (-)
G226648 NA non-coding downstream 85580 14133290 ~ 14133632 (-)
G226643 NA non-coding downstream 93147 14125063 ~ 14126065 (-)
G226689 NA non-coding upstream 2349 14222129 ~ 14222362 (-)
G226731 NA non-coding upstream 13384 14233164 ~ 14233390 (-)
G226736 NA non-coding upstream 20223 14240003 ~ 14240269 (-)
G226737 NA non-coding upstream 21345 14241125 ~ 14241374 (-)
G226738 LOC106578046 non-coding upstream 21937 14241717 ~ 14242202 (-)
wu:fe05a04 LOC106578221 other downstream 291379 13909746 ~ 13927861 (-)
G226294 LOC100136012 other downstream 874837 13344074 ~ 13344375 (-)
G226224 NA other downstream 994697 13223884 ~ 13224515 (-)
G226187 NA other downstream 1038940 13177178 ~ 13180272 (-)
G227060 NA other upstream 209013 14428793 ~ 14475166 (-)
LOC110503689 tm149 other upstream 379009 14598789 ~ 14638314 (-)
LOC110512327 LOC106578554 other upstream 1316585 15536363 ~ 15539677 (-)
G228094 NA other upstream 1381235 15601015 ~ 15601488 (-)

Expression


Co-expression Network