G226701


Basic Information

Item Value
gene id G226701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14231503 ~ 14231749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259318
ctcgtggttagagcattgggccaggaaccaaaaggttgctagattgaatcccagagctgacaaggtacaaatctgtcgttctgcccctgaacgaggcagttaacccactgttcctaggctgtcattgtaaataacaatttgttcttaactgacttgcctagttttaaaAAAAGTGTAATTTCATAcaggtcccctgtgggaattgaaATTCACAACACTAGTGTTGTGAGTTCAACAACTAAGCCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259318 True 247 lncRNA 0.43 1 14231503 14231749

Neighbor

gene id symbol gene type direction distance location
LOC110510755 LOC106561134 coding upstream 11687 14204907 ~ 14219816 (+)
LOC110510523 LOC106573797 coding upstream 87565 14140286 ~ 14152666 (+)
LOC110510707 LOC106593417 coding upstream 155984 14073400 ~ 14075519 (+)
LOC110503682 trp-iii coding upstream 227553 14001152 ~ 14003950 (+)
LOC110510221 LOC106577525 coding upstream 690177 13539000 ~ 13541326 (+)
LOC110510822 smg9 coding downstream 46601 14278350 ~ 14284963 (+)
LOC110510848 NA coding downstream 83848 14315597 ~ 14320723 (+)
LOC110510776 LOC106578012 coding downstream 95476 14327225 ~ 14331310 (+)
LOC118964341 NA coding downstream 174372 14406121 ~ 14406958 (+)
LOC110510549 LOC106578340 coding downstream 200191 14431940 ~ 14442914 (+)
G225995 NA non-coding upstream 31458 14199810 ~ 14200045 (+)
G225992 NA non-coding upstream 33637 14197592 ~ 14197866 (+)
G225965 NA non-coding upstream 96286 14134915 ~ 14135217 (+)
G225962 NA non-coding upstream 99731 14131534 ~ 14131772 (+)
G226705 NA non-coding downstream 5689 14237438 ~ 14237651 (+)
G226714 NA non-coding downstream 18257 14250006 ~ 14250316 (+)
G226718 NA non-coding downstream 27445 14259194 ~ 14259413 (+)
G226722 NA non-coding downstream 33511 14265260 ~ 14265604 (+)
G226695 NA non-coding downstream 37478 14269227 ~ 14269886 (+)
G225920 NA other upstream 184655 14046586 ~ 14046848 (+)
G225859 LOC106605594 other upstream 239482 13990236 ~ 13992021 (+)
G225710 NA other upstream 585492 13645569 ~ 13646011 (+)
G225672 NA other upstream 680921 13550098 ~ 13550582 (+)
G226807 LOC106578340 other downstream 157728 14389198 ~ 14390428 (+)
G226791 NA other downstream 177123 14408872 ~ 14410081 (+)
G226941 NA other downstream 471852 14703601 ~ 14703975 (+)
LOC118944476 LOC106605624 other downstream 710401 14942150 ~ 14984145 (+)

Expression


Co-expression Network