G226695


Basic Information

Item Value
gene id G226695
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14269227 ~ 14269886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259312
GAAATAAAACAATTTCTCTTCACATGGCCTCAGTCAGAGGGATAAACTGCTAGTCAGTTGCCATATCTCAAGGGCTGCCCGCTCGCCCACTCAAGCACTCCCTAGGGTACTGTGGAGTTACCAAAGTAGACTGAATTTAACAGAGACTCTTTCGCATAAATAACTAATCTAGACTGTTAAAGCCCGACATATATTGTTGTTTTAAGGATGACTGTATGGGGAAGCAGTCAGTTTACATAGTTAAGCTATTCTCATAACGATCAAGACAAGTGGCATAGCCTAATAAAGTACGCAGGCTGATATTTATTGGGATAACTCATGTACTGGAGGCAGATCtgcagtggtcactagctggcacagccacagtcATAACATCTGATTTGAAACCCAACCACGCTGCTAAACATAATGCCAAATTGTTGTTTTCAttaatttttacaatatagccaactTTGAGTTTGTAAGTCACCCATTTAGTGGAAACCGCTCAGTTCTGCTTCCAGGGCAAGACTCAagacaataaatgtcaacctgcatAAAGTACATGGAGACATTGCTCACTGTTATTCTAATTCTGATGTGACAGCTCCCCCCAGAGGATATGTACATGCATGACAATCACACACCAGTCATTGGCATGAATGAATCATTTCATATTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259312 True 660 lncRNA 0.41 1 14269227 14269886

Neighbor

gene id symbol gene type direction distance location
LOC110510617 LOC106578046 coding upstream 613 14226825 ~ 14268614 (+)
LOC110510755 LOC106561134 coding upstream 49411 14204907 ~ 14219816 (+)
LOC110510523 LOC106573797 coding upstream 125289 14140286 ~ 14152666 (+)
LOC110510707 LOC106593417 coding upstream 193708 14073400 ~ 14075519 (+)
LOC110503682 trp-iii coding upstream 265277 14001152 ~ 14003950 (+)
LOC110510822 smg9 coding downstream 8464 14278350 ~ 14284963 (+)
LOC110510848 NA coding downstream 45711 14315597 ~ 14320723 (+)
LOC110510776 LOC106578012 coding downstream 57339 14327225 ~ 14331310 (+)
LOC118964341 NA coding downstream 136235 14406121 ~ 14406958 (+)
LOC110510549 LOC106578340 coding downstream 162054 14431940 ~ 14442914 (+)
G226722 NA non-coding upstream 3623 14265260 ~ 14265604 (+)
G226718 NA non-coding upstream 9814 14259194 ~ 14259413 (+)
G226714 NA non-coding upstream 18911 14250006 ~ 14250316 (+)
G226705 NA non-coding upstream 31576 14237438 ~ 14237651 (+)
G226701 NA non-coding upstream 37478 14231503 ~ 14231749 (+)
G226694 NA non-coding downstream 211 14270097 ~ 14270299 (+)
G226696 NA non-coding downstream 873 14270759 ~ 14271021 (+)
G226726 NA non-coding downstream 5771 14275657 ~ 14275942 (+)
G226774 NA non-coding downstream 43469 14313355 ~ 14313624 (+)
G225920 NA other upstream 222379 14046586 ~ 14046848 (+)
G225859 LOC106605594 other upstream 277206 13990236 ~ 13992021 (+)
G225710 NA other upstream 623216 13645569 ~ 13646011 (+)
G225672 NA other upstream 718645 13550098 ~ 13550582 (+)
G226807 LOC106578340 other downstream 119591 14389198 ~ 14390428 (+)
G226791 NA other downstream 138986 14408872 ~ 14410081 (+)
G226941 NA other downstream 433715 14703601 ~ 14703975 (+)
LOC118944476 LOC106605624 other downstream 672264 14942150 ~ 14984145 (+)

Expression


Co-expression Network