G226764


Basic Information

Item Value
gene id G226764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14284586 ~ 14305692 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259381
GAAGagaatgcctggttattctttttaaatgccttcctcaccatcttaaataagcatgccccattcaagaaatttagaaccaggaacagatatagcccttggttctctccagacctgactgcccttaaccaacacaaaaacatcatattgcgttctgcattagcatcaaacagcccccgtgaaatgcaacttttcagggaagctagaaaccaatatacagaggcaccacggctagctttttcaagcagaaacttgcttcctgcaacacaaactcaaaaaggttctgggacactgtaaagtccatggagaataagaacacctcctcccagcagtccactgcactgaggataggaaacactgtcaccaccgataaatctgctataattgagaatttcaacaagcatttttctacggctggccatgctttccacctggctactcctaccccggtcaacagagaagctcacagatcactgcacctgtacataggccatctataatttagcccaaaaaactacctctccccctactgtatttatgtatttagttcctttgcaccccattatttttatttctactttgcacattcttccactgcaaatctaccattccagtgttttacttgctatattgtatttacttcgccaccatggccttttgttttgttgcctttacctcccttatctcacctcatttgctcacattgtatatagacttatttttctactgtattatttactgtatgtttgttttactacatgtgtaactctgtgtcaaactgctttgccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaaaaaaggtgaaatacattttttttaaatgaataaacAACTAAGATAACATTATGTACTATAGAGATGACAGCCCAGACCCGTATTGTGTGCAGTGACAAATTAAATATAGGTCCATGTACCTTTGCACTTATTTGGTTTCTGTCTTTTCTCTGCAGTGCCAGTGTCCTCCTCCATGGTCACAATGGACACCTGCTTCTCTTCCACTGAACTTCAACCTGAATGaacaaaaaaaactgaattgAAACTCTTAGGTGGCACATACACATTATTTGCTGGTCCAAATTCACTCCCTATCCCTCCTCCTTGGCCCTGACTTAATTTttctgaagggtctggataggtataatcAGGAAAGTGGTGGAGCTTACACCGCATTGCTTACACATTTACAAACATCTAAGGGTTAGGGACAAGGGAAAGAGTTAGGAAATGGCTGACCCCCGACCCCccctttgtacactgctgctactcgctgtttgtttattacctatgcatagtaacttcgcccccacctacatgtacagattacctcaattagcctgtACCCCCCCCACACTGCCCCGAttccggtgccccctgtatatagcctcattattgttactcTTATTGTGTTACCTCTATTACTTTTATTGTAGTCTacttctggaggcagctctgcagagtggtcattagctggcacagccacaaaatcagattttaaacctaaccacactgctaaccctaaatTAGGACCAAAATTGTTGTCATGaattttttacaatatagccagcCTATCTAAggggtgtcgtggaaatttccttaattaccaaatgatgagagagcaaatcacacaccagtcagagttgtgcttaatcttcacctttaataataatgaagcttttgcaatagcattttgactttcaacagttcagtatctctaatgaaaagttgagagtggtcaacataatggcaactgggatcctttatagcaaagatcaaCCCCCCCTGgtcgacatgacaaaccacaggtcttaggaacttacacaaaTAAAAACTTTACTTCAGAGAGAAATATCCCCTAGCCAGACAGAATTGGCTATAAAtgatcgttcagtttggtctcctaaacaaagctcTTATCTCATCCTTGGTACAAAATGGTACCAAGACATTACCCCCACCCAATTCTGGACAAGCTCACAGAGAGGaaagtgagcctctaggtcaagaTAGGGGCAACGAGAGAGGGAACATagaatggttccagacactgccatcctcctctccccgatgggaaaagtagggagtgactggcacacagacacaatggagccaagagataattggttccccatcaatcatcccttcacatggtttaaaatatatgtttacacatgatgacaccttgacctctcccATCTCTGCGGCCCAAACAACTtagtcctgacagagaacagataactgcaaatggccaccactatagtacaacaaaatacattctcatgagaaataactcataagcatatcatgaaaataaaacatcttatctatgttacccaactaattctgatgaATCCCCAACaggggaaatcgctcagttctgcctccaggacaagactgaTGTCAACATGCTTGTGAAGTTAATGTAAAAATGGTCTATTTAGTGTAAATGCGTTTAATTGCAAGCCAACAGTATGTATAGACTAGTGCTTATGAAGCAACGTATGAATGCAATGTTATTCTACATTTATAAACTCGATTGTTTCCGAATGATATCACATTGTCAGTGTCATTTTCTTAACCTTATCACCATTGTTGCTTACAGCTGATTTGATTGTACAGTTCAAATTAAGTGGTTAAAATTTATCAAATCTGGTTTAGAGATTGAGTGGGTTGTTTGTTGAGAGTTCAAGGAATTGTTATGATCTTCCCTACTCTGctaagtaaaatatattttgagctGTAGGCTATGGTTTATCTGACAAATAGGCTGGATACCTATTTGAAATAAAATGCACCGGCTACTCCTGTTTATTTAGATCATGGCATGTAGCCTAGGCTACATCTGGAAACTCCAGGAATGAGGCAACTTTGATTTCAAAAGAGAACACAActcttgggctcccgagtggtgcagcggtctaaggcactgcatctcagtgcttgaggcgtcactacagacacactggtccaattccaggctgtataccAACCgcctgtgatcgggagtcccatagggtggtgcacaattggcccagcgtcatccgggtttggccgtcattgtaaataagaatttgttcttaactgacttgcctagttaaataaagtccccAGTGTTATTTCTGCTCAAGATTCAGTTCTCTCGCTTAGCTGCCCTGATTGGGATCAGTTCCCTCCATGGTTACCACGGTCAACTTCTCTGCATCCGTCACCACGGGCCCCTCCTCAACGGCCTTCTCCATGGTGACCACAGTCACCTTCTCTGCATCCTCCATCACCACGGGCCCTTCCGAAATATGCCGATACTGAAAACCATGCATACTATAAAGCAATACACTTTTGTGGTGGAAATACCAAACAATTacacattttcaaaataaaaaattacaCATACACAACAGTATTTGCAGTGTTTCAAATAATTTGATTGCAAATGTGACAGGGGCCTTGTAGAAACTTGTTAGGCTACTAATTTTCAATAACCATGTATGACCACAAAAGCCTGTGTACAGTACGGCCaagtacagtaaaataatgtgGTTGAAATGTGACTGGCTATATGCCAACATATATCATAGGAATTTGAATTACTAGTGATGCCACTGTGCGATTCTGGGAAGAATAAAAAGGCTAAAAATGAAAAACACAGATCCATAACTATAGACTGAGATTCCGTCACTCAGCCGGTGCTTACAACAAAGATGTCATTTGAGAATCGATTGTTCACTCATTTGAATGTAAATGTAACACATTTAAGGGTGGTTCACACCAAAAAATAGATACAACTTCAGCAAATACTTGCTCAATATAGATTTGATATCTTTCAAGTGTCTTTTATAGGGGAGTACATGATCCACTCCACGAACATGTGAGAATGCCAACCAACTGTTAATCAACTGTTGTTTACAAATCATTCATACTTGTGTCAAGGATTAGAATCTCATTTTCAGTTTTGAAATACCCAATTCTAACATTTAAAAATCTGATTAGAAAAGTTTTGTAAAACTTGGTCCTGTTGATTACTATAATTCACAGCTGTGTCTCACTCTAGATAACTGCTGTCTGAAACCAGACATACACTGAAGAAGGTGGACAACGAAACGTTTGTGTTAGTTTATTCCCTGGcctgctgaaaaacaaaaaaatgaaagCGGAAGTTGGGAAGTTTTGTATATTCTGTGTTCAAACCACCCTTTATTCGTggtatatttgtttaacacaccAACATTTTGAGTTTGAGCGCAATGGTACGTAAAAACATGATTTATTTTCATAAAGACTTCACTCATGCGCTGCTTATTCGGCGAGTGTAACATCATTAGTTATAAACTAAGTAAAGAATATTTGTGTTAATCTGCATCCATCCCTTATGGCACTTTATTGGGGTATTCCCTTATAGAGTCACATGATGTTGTTTGTAAAATGCTATGTTCTCATTGCAATATGACAATGTTGCATGtactctgagtgtacaaaacattaataacaccttcctaatactgagttgcactTGGGCCATGGAATCTAAAAtatgtcaaaagcgttccacagggatggtggcccatgttgactccaatgcttcccactgttgtgtcaagttggctagatgcccttttgggtggtggaccattcttgatacacacgggaaactgttgagcataaaaacccaacagcgttgcagttcttgacacactcaaactggtgcacttggcacctactactatacccagttcaaaggctattaaatattttgtcttgcccattcatcctttgaatggcacacgtacacaatccatgtctcatttgtctcaaggcttaaaagtccttATTTTACCAGTCTCATCtccttcacctacactgattgaagtgtatttaacaggtaacatcaataagggatcatagctttcacctggtcagtctacatcAGGGAAAGAGCAGATGTCCACACTCAGTGTATGCagacactggtatggtgctggTGTAGAATAAAGCCTTAAGTTAAAAAGTGGCCCTTTTTTTAATCACTGGACAAGTTAGTGGAAATACAGTTACTGTTGTGGTTGTACTGGTCTTCATTTTATATGCTTTGCTCAACTTAGGACTTCTAGTATCATGGTGTGGTCTCCTCAGGTCTTCCTCATCTCCAATTTCAGTACCTCTCTATGACTTCCCCAAACTGGTGGAGACAATGGAGAAGGAACTTCCTGTTCTCAAGAGGCATGTCCTGCTGTTAGCCATTCCCAACATGAGCCTGAAAACTAACCAGAGGAAGAACGAGGCTCTCCAAGCTAACATATGGGGATCAGCTCTTGTATCTGGCTGTGGGGCAACAATACCAATTTCAGGTCACTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259381 True 5390 lncRNA 0.41 4 14284586 14305692

Neighbor

gene id symbol gene type direction distance location
si:dkey-79d12.4 LOC106605603 coding downstream 5444 14270653 ~ 14279142 (-)
LOC110510806 LOC106578077 coding downstream 92280 14148137 ~ 14192306 (-)
fpr1 LOC106605601 coding downstream 182305 14099401 ~ 14102281 (-)
LOC110510492 LOC106578091 coding downstream 188482 14084118 ~ 14096104 (-)
LOC110510454 LOC106595663 coding downstream 205601 14026102 ~ 14078985 (-)
LOC110510581 LOC106578340 coding upstream 83506 14389198 ~ 14397283 (-)
LOC110510742 LOC106578317 coding upstream 169990 14475682 ~ 14481655 (-)
antol lin37 coding upstream 202714 14508406 ~ 14511632 (-)
psenen LOC106577931 coding upstream 213505 14519197 ~ 14524902 (-)
LOC110503689 tm149 coding upstream 295210 14598789 ~ 14638314 (-)
G226758 NA non-coding downstream 16957 14267323 ~ 14267629 (-)
G226755 NA non-coding downstream 19808 14264538 ~ 14264778 (-)
G226754 NA non-coding downstream 20913 14262939 ~ 14263673 (-)
G226749 NA non-coding downstream 28946 14255404 ~ 14255640 (-)
G226771 NA non-coding upstream 2783 14308475 ~ 14308908 (-)
G227013 NA non-coding upstream 10979 14316671 ~ 14316928 (-)
G227014 NA non-coding upstream 11274 14316966 ~ 14317265 (-)
G227017 NA non-coding upstream 15028 14320720 ~ 14321226 (-)
G227011 NA non-coding upstream 52484 14358176 ~ 14381950 (-)
LOC110538195 LOC106578103 other downstream 282778 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 356753 13909746 ~ 13927861 (-)
G226294 LOC100136012 other downstream 940211 13344074 ~ 13344375 (-)
G226224 NA other downstream 1060071 13223884 ~ 13224515 (-)
G226187 NA other downstream 1104314 13177178 ~ 13180272 (-)
G227060 NA other upstream 123101 14428793 ~ 14475166 (-)
LOC110512327 LOC106578554 other upstream 1230673 15536363 ~ 15539677 (-)
G228094 NA other upstream 1295323 15601015 ~ 15601488 (-)

Expression


Co-expression Network