XLOC_021889


Basic Information

Item Value
gene id XLOC_021889
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 37113287 ~ 37118114 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044685
TCTTGTTCGTCCACAGCTAAAGCCCACGAGTCGGTTGACATGGCTTAATCGCAGATATATTAACTTTTTAACCGGTCTTGATAACTCTTCTGATGATGACGGACTGTTCACTTCACGCGGCTTCACGAGAATGTGCACACTGCCAGCGCGCGCTCACAGAACGCTGTCCGGCCGGAAGTTATTATTACACGATGCCCAGTTCCAGATTATTAACTTCGACCTATGAACCACCGCAGCCCTCTGTAAATCCCAGCAGACGAGATAAGGGACGTTCAGGAAGAGCGagtgagcaagagagagagaaagagagacagtaAATAGCACATGTTAATTTAATTGAGCAACAGAAGCTGAGATTCGAGCCAAAGCAGCGCACATcactaaccacacacacacacacacacacacacacactttctccaaccaaccaacctgttGTCTTTTAAGAAGCCCTGGAGGCTCCATATTGATTGTCATGGTTACGTCCTCTGCAAAAGCAGATTAATCAGACGCCACAGCCATGAAATgcattcataaaataataataaatcaacgCCTGTCATATTGAAACCAAGATAGTGAGCTTAGGAAAGCATGAATGATTGaaggaaaatttaaataaataaaacgtcagTCTGAATCCTTCGCATCATCTGTGATCTCTCACCCTCCCCTCATTTCCCCCCCTCATGCATGGTGTTGCATTTCAGCCCGTGGTACCCTATCAAATAGGATACATGAATGGGCTCTCGTCACTGATTACGGAGAGACCGAGAGGTGGGGGAGAGCTGGTAGGTGGGTGGTACAGATGCTGAGGGGAGAATTGAGCGTTGGCGGGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044685 True 839 lncRNA 0.47 2 37113287 37118114

Neighbor

gene id symbol gene type direction distance location
XLOC_021888 cptp coding upstream 19082 37086159 ~ 37094205 (+)
XLOC_021887 NA coding upstream 74878 37026350 ~ 37038409 (+)
XLOC_021886 CR926464.1 coding upstream 217918 36891729 ~ 36895369 (+)
XLOC_021885 NA coding upstream 267307 36842632 ~ 36845980 (+)
XLOC_021883 march9 coding upstream 314667 36771593 ~ 36798620 (+)
XLOC_021890 vwa5b1 coding downstream 67133 37185247 ~ 37198890 (+)
XLOC_021891 NA coding downstream 109067 37227181 ~ 37433229 (+)
XLOC_021892 NA coding downstream 168300 37286414 ~ 37287626 (+)
XLOC_021893 fam43b coding downstream 205848 37323962 ~ 37325961 (+)
XLOC_021894 AL954146.2 coding downstream 320720 37438834 ~ 37438950 (+)
XLOC_021884 dre-mir-2191 non-coding upstream 322955 36790223 ~ 36790332 (+)
XLOC_021878 NA non-coding upstream 527536 36585179 ~ 36585751 (+)
XLOC_021899 AL954146.3 non-coding downstream 374621 37492735 ~ 37492851 (+)
XLOC_021900 NA non-coding downstream 406776 37524890 ~ 37546006 (+)

Expression


Co-expression Network