G226774


Basic Information

Item Value
gene id G226774
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14313355 ~ 14313624 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259393
gaatagcccgcactgggctgtgctggtgaaccggggacaccatgcgtaaggctggtgccatgtacgccggcccgaggagacgcactggagaccagatgcgcagagccggcttcatggcacctggctcgacgcccactctagcccggccgatacggggagctgggatgtagcgcaccgggctaagcacgcatactggggacaccgtgcgctccaccgcataacatggtgcctgaccagtacgacgccctctctctccacggtaagcacggg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595571

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259393 True 270 lncRNA 0.65 1 14313355 14313624

Neighbor

gene id symbol gene type direction distance location
LOC110510822 smg9 coding upstream 29454 14278350 ~ 14284963 (+)
LOC110510617 LOC106578046 coding upstream 44741 14226825 ~ 14268614 (+)
LOC110510755 LOC106561134 coding upstream 93539 14204907 ~ 14219816 (+)
LOC110510523 LOC106573797 coding upstream 169417 14140286 ~ 14152666 (+)
LOC110510707 LOC106593417 coding upstream 237836 14073400 ~ 14075519 (+)
LOC110510848 NA coding downstream 1973 14315597 ~ 14320723 (+)
LOC110510776 LOC106578012 coding downstream 13601 14327225 ~ 14331310 (+)
LOC118964341 NA coding downstream 92497 14406121 ~ 14406958 (+)
LOC110510549 LOC106578340 coding downstream 118316 14431940 ~ 14442914 (+)
LOC110510729 LOC106578340 coding downstream 154469 14468093 ~ 14471031 (+)
G226726 NA non-coding upstream 37413 14275657 ~ 14275942 (+)
G226696 NA non-coding upstream 42334 14270759 ~ 14271021 (+)
G226694 NA non-coding upstream 43056 14270097 ~ 14270299 (+)
G226695 NA non-coding upstream 43469 14269227 ~ 14269886 (+)
G226793 NA non-coding downstream 46880 14360504 ~ 14360778 (+)
G226797 NA non-coding downstream 53835 14367459 ~ 14371078 (+)
G226807 LOC106578340 non-coding downstream 75574 14389198 ~ 14390428 (+)
G226845 LOC107675859 non-coding downstream 209557 14523181 ~ 14524514 (+)
G225920 NA other upstream 266507 14046586 ~ 14046848 (+)
LOC110503682 trp-iii other upstream 309429 14001152 ~ 14003950 (+)
G225859 LOC106605594 other upstream 321334 13990236 ~ 13992021 (+)
G225710 NA other upstream 667344 13645569 ~ 13646011 (+)
G226791 NA other downstream 95248 14408872 ~ 14410081 (+)
G226941 NA other downstream 389977 14703601 ~ 14703975 (+)
LOC118944476 LOC106605624 other downstream 628526 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 other downstream 676896 14984771 ~ 14991394 (+)

Expression


Co-expression Network