G227011


Basic Information

Item Value
gene id G227011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14358176 ~ 14381950 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259672
GTTTCCTAGTCATTAGTGtcgatttttttatttgattgctAATATATTCATTTGGAATTTGAGAATCATAGCTGGAGCAATGTTTGTACTATTAAAATTGGGCTATTATACTTCTGGGAATTACCGATAGTGACGTGTTTTGATTTTACTTTGTAGATGGGGTTTATATCCGGAGAATTTAGGATAATTCTGGCAATAGCATTAgtggttcagtggtagaattctcgcctgcaacGCGGGAGGCCCGAGTTCCATTCCCAGTCACGGCGCTGGCTCAATTTAGAGTTTCTGATTGTAAATAatctatttgtatgttttgcctggaAAGTTATGGTCGCTAGTGTTTGTATAAGAGATAAATTGAACGTTTTCAATAgattgtttaggttaaattgatAGGCTAATTCAATTTAAAACAATAACGAAGCGAATTCTGATGCAAGACGATGTCTGTTCACTAAATTATCTGctggaataatgtattgagaaTTGGGTCGTATTTAAATTACTGTATCAATAGAGAAGACAGTTACCTAAGTTAAAGACACTCTGAATGATAGCGGGGAGAGAATGGCGATAGGAAAGTGGTTACCGAAATGTTTTTCATTCTTATAGATTGACTGACGCATGTTATAATTTTGGcgctgtgtgtgttatttttaaaGAAATATGATACATTTCATAAGTGTGGAGAGCAAAGAGCATAAAGTTGAGGTTTTAATCTTACGATAGAGGTAAGGGAAAAACGTTGAAATGAGAGGGGTTATATTTTTGCCCAACTGGGGGAAAAAGAAATAGGAAAGTTGAGTTGAAAGTATGGAAGAGAGTGAGTTGTTATGTTGGCTGCTCATTGTCAGGGAAAGTTGCTGGAGGCAGGTAGATTGTTGTAGAATAACGTACATTTGCGTTATTAGTTTGAATATACAATAACCTTACTCTAATTGTTTTGACCGTTGTTCAGGTCCATTTTTTTTCTGTATTTCTAGCAGCTGATTCGCTAGGTGGGCATCATAGATTTGTGGCGTTTATATTTACTGTATTAGGCTATGAGAATTGGGAGACTGGATGTATGAATCATAAAACATCGTAAGGATAGCTTCTGATTGTTATTGATTCTTGGTTTGATTGTTTAAGTAACACCAGTAAATTTGAGCAGGAAAGTTCATGTACTCTAAGGTTATGGTAtgtttccattatgtggaacAATGTCAGGTCATTAAAGGTGATTGCTGGATTGAATAGTACGCCAACCTGTTGACAGAAGACTGAATGGGTATGTATGAATGTTGAAAAGCAAGATTGGGCCAAAGACTGAactagtatgttaagtgggggagtatcatagattttaattatagtgttgttatagtagttatatagtgtagtcaaaacaatttcatatgttttggtaaattagctaggttgaatttggtattTGAGTTCCTTTATTATTTGCTTTTTAAAAgaaaggttggaatcaagtatgatgccttggcacttaaaatcagataccaccaggagctttttacatcagtagttgttttttgaggaacatgcagactgtgttttattttattgagatGTAAACATGAGTCACTTAGCTATTTTGTCATCTGAATCATtatagCTAAGTGACTCATGTTTACatctcaataaaataaaacacagtctgcatgttcctcaaaaaacaactactgatgtaa

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU259672 True 1703 lncRNA 0.35 2 14358176 14381950

Neighbor

gene id symbol gene type direction distance location
si:dkey-79d12.4 LOC106605603 coding downstream 79034 14270653 ~ 14279142 (-)
LOC110510806 LOC106578077 coding downstream 165870 14148137 ~ 14192306 (-)
fpr1 LOC106605601 coding downstream 255895 14099401 ~ 14102281 (-)
LOC110510492 LOC106578091 coding downstream 262072 14084118 ~ 14096104 (-)
LOC110510454 LOC106595663 coding downstream 279191 14026102 ~ 14078985 (-)
LOC110510581 LOC106578340 coding upstream 7248 14389198 ~ 14397283 (-)
LOC110510742 LOC106578317 coding upstream 93732 14475682 ~ 14481655 (-)
antol lin37 coding upstream 126456 14508406 ~ 14511632 (-)
psenen LOC106577931 coding upstream 137247 14519197 ~ 14524902 (-)
LOC110503689 tm149 coding upstream 218952 14598789 ~ 14638314 (-)
G227017 NA non-coding downstream 36950 14320720 ~ 14321226 (-)
G227014 NA non-coding downstream 40911 14316966 ~ 14317265 (-)
G227013 NA non-coding downstream 41248 14316671 ~ 14316928 (-)
G226771 NA non-coding downstream 49268 14308475 ~ 14308908 (-)
G226764 NA non-coding downstream 52484 14284586 ~ 14305692 (-)
G227064 NA non-coding upstream 23951 14405901 ~ 14406150 (-)
G227015 NA non-coding upstream 27152 14409102 ~ 14410080 (-)
G227065 LOC106577515 non-coding upstream 33110 14415060 ~ 14416878 (-)
G227068 NA non-coding upstream 42513 14424463 ~ 14429445 (-)
G227094 NA non-coding upstream 114843 14496793 ~ 14498854 (-)
LOC110538195 LOC106578103 other downstream 356368 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 430343 13909746 ~ 13927861 (-)
G226294 LOC100136012 other downstream 1013801 13344074 ~ 13344375 (-)
G226224 NA other downstream 1133661 13223884 ~ 13224515 (-)
G226187 NA other downstream 1177904 13177178 ~ 13180272 (-)
G227060 NA other upstream 46843 14428793 ~ 14475166 (-)
LOC110512327 LOC106578554 other upstream 1154415 15536363 ~ 15539677 (-)
G228094 NA other upstream 1219065 15601015 ~ 15601488 (-)

Expression


Co-expression Network