G226797


Basic Information

Item Value
gene id G226797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14367459 ~ 14371078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259416
gtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttgttggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggta

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU259416 True 274 lncRNA 0.47 2 14367459 14371078

Neighbor

gene id symbol gene type direction distance location
LOC110510776 LOC106578012 coding upstream 36149 14327225 ~ 14331310 (+)
LOC110510848 NA coding upstream 46736 14315597 ~ 14320723 (+)
LOC110510822 smg9 coding upstream 83558 14278350 ~ 14284963 (+)
LOC110510617 LOC106578046 coding upstream 98845 14226825 ~ 14268614 (+)
LOC110510755 LOC106561134 coding upstream 147643 14204907 ~ 14219816 (+)
LOC118964341 NA coding downstream 35043 14406121 ~ 14406958 (+)
LOC110510549 LOC106578340 coding downstream 60862 14431940 ~ 14442914 (+)
LOC110510729 LOC106578340 coding downstream 97015 14468093 ~ 14471031 (+)
LOC110510603 LOC106578002 coding downstream 113844 14484922 ~ 14495193 (+)
LOC110510592 hsp70-3 coding downstream 124266 14495344 ~ 14498631 (+)
G226793 NA non-coding upstream 6681 14360504 ~ 14360778 (+)
G226774 NA non-coding upstream 53835 14313355 ~ 14313624 (+)
G226726 NA non-coding upstream 91517 14275657 ~ 14275942 (+)
G226696 NA non-coding upstream 96438 14270759 ~ 14271021 (+)
G226807 LOC106578340 non-coding downstream 18120 14389198 ~ 14390428 (+)
G226845 LOC107675859 non-coding downstream 152103 14523181 ~ 14524514 (+)
G226889 LOC106577926 non-coding downstream 247862 14618940 ~ 14623217 (+)
G226931 NA non-coding downstream 315126 14686204 ~ 14686513 (+)
G225920 NA other upstream 320611 14046586 ~ 14046848 (+)
LOC110503682 trp-iii other upstream 363533 14001152 ~ 14003950 (+)
G225859 LOC106605594 other upstream 375438 13990236 ~ 13992021 (+)
G225710 NA other upstream 721448 13645569 ~ 13646011 (+)
G226791 NA other downstream 37794 14408872 ~ 14410081 (+)
G226941 NA other downstream 332523 14703601 ~ 14703975 (+)
LOC118944476 LOC106605624 other downstream 571072 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 other downstream 619442 14984771 ~ 14991394 (+)

Expression


Co-expression Network