G227065 (LOC106577515)


Basic Information

Item Value
gene id G227065
gene name LOC106577515
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14415060 ~ 14416878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259731
AAAGAATCCAAATTGTCTTGAATGGGATAAGATCCAATATAATGTCGATACTTCTCAGATGTGAAGAAGTGGGGGAACCAGCCTTTCACAGATTTTCAAAACCCAAGGCCTCTGGCATTTGAGCCAATCTCATGGGTAAGAAGCTTAAACTGTCAATGTATCTCTGGTTGAAGGCAGGGTCTACAAAACACAAGATTTTACTACCTTGAGCTATGATACTGGGTGCAACGCCTTGCTGTATCAAGGGGTTCAGAAGAAGGTAAGAGTCATCGGCTCTAGCATTGTGCGCTATAAACGTGAAGTTTCTGTACTGGGGTTTTCTGTGTTTTAGAAAGAGCAGTGCACAATTGGGTCCCTCTGCCGACCACTTTTCACCCTTGAAAGTCATGGTAGATACAAAAATAGGCAAATGAACCCCCGATTGCTGATTTGTCTCACAATCATAGAACACGTATTTCTCTGAATGTTCATCTTCATCCAAGGGCTGAATATAACACTTGTGTGACCCTTCTTGAACCACTTCAGCATCTCTGCTTTTCAAAGGCCCTTTACAGATTGGACAGTGTATGATTCCACACACATGCGGTTTAGGGCTATCTATTTTAAGGTTGAAATTGCAATGACATTTTGGGCATTTCTTGTTAATGTCACAACTGCTTACAGATTTACAGGCCTTGGGGTGCCATGTTTCAATTTTGTGTTTTTCGTAACAGTAGGCCGAACAACATGTGCGGTGACAATCCTCACAGGGGGTCAGGTTTAAGGGATGCATAGGGCAATTTTCATCCAGACATAATTAACAGTAATAACGGCACGAGTTTATGAGGTAGGCCCTTTTATTGCTTATTATTTCTGATTGCATTAGGCTATCTAGCTTCCTTCTCTGACCCCCACCACCCTGGAGTTGACGTATTATTTGCACTACAAGCTCGAGGGTCCTATCGGCTATGACGGATAAATTTGACTGAACAAGTCGTTCTAGCACGGCGATAAATTGTTCAAGATCTGCTTCGCCATTGGGTAAAATAAGAGATACCGTGTTATGCAGGCTATCTCCATAAATGTACAACTGTAAGACATCACGTGGTTCGCCATAATCTCTTGCCCTATCTAACAGTTCGGTCAGAGTATCCAACATCATTACGTACAACACAGCATAGTCAAGATTCTGATTCACCCATGTGAAATTGAAAACTGTCGAATCTCTGTATTGTTGAATTTATTTCGGTACACAACCCGAACACTTCGATCAATACCGTCTCCTTCCTGatttattagacaattttccaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106577515

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259731 True 1290 lncRNA 0.42 2 14415060 14416878

Neighbor

gene id symbol gene type direction distance location
LOC110510581 LOC106578340 coding downstream 17777 14389198 ~ 14397283 (-)
si:dkey-79d12.4 LOC106605603 coding downstream 135918 14270653 ~ 14279142 (-)
LOC110510806 LOC106578077 coding downstream 222754 14148137 ~ 14192306 (-)
fpr1 LOC106605601 coding downstream 312779 14099401 ~ 14102281 (-)
LOC110510492 LOC106578091 coding downstream 318956 14084118 ~ 14096104 (-)
LOC110510742 LOC106578317 coding upstream 58804 14475682 ~ 14481655 (-)
antol lin37 coding upstream 91528 14508406 ~ 14511632 (-)
psenen LOC106577931 coding upstream 102319 14519197 ~ 14524902 (-)
LOC110503689 tm149 coding upstream 184024 14598789 ~ 14638314 (-)
LOC110510719 LOC106577908 coding upstream 222891 14639769 ~ 14642909 (-)
G227015 NA non-coding downstream 4980 14409102 ~ 14410080 (-)
G227064 NA non-coding downstream 8910 14405901 ~ 14406150 (-)
G227008 NA non-coding downstream 31149 14377464 ~ 14383911 (-)
G227011 NA non-coding downstream 33110 14358176 ~ 14381950 (-)
G227017 NA non-coding downstream 93834 14320720 ~ 14321226 (-)
G227068 NA non-coding upstream 7585 14424463 ~ 14429445 (-)
G227094 NA non-coding upstream 79915 14496793 ~ 14498854 (-)
G227162 LOC106577926 non-coding upstream 202061 14618939 ~ 14623213 (-)
G227163 NA non-coding upstream 203390 14620268 ~ 14625116 (-)
LOC110538195 LOC106578103 other downstream 413252 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 487227 13909746 ~ 13927861 (-)
G226294 LOC100136012 other downstream 1070685 13344074 ~ 13344375 (-)
G226224 NA other downstream 1190545 13223884 ~ 13224515 (-)
G226187 NA other downstream 1234788 13177178 ~ 13180272 (-)
G227060 NA other upstream 11915 14428793 ~ 14475166 (-)
LOC110512327 LOC106578554 other upstream 1119487 15536363 ~ 15539677 (-)
G228094 NA other upstream 1184137 15601015 ~ 15601488 (-)

Expression


Co-expression Network