G226931


Basic Information

Item Value
gene id G226931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14686204 ~ 14686513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259583
CCTTAATAAATAATCCACTAAGACATGTCTTCTGGCATTCACTTCCAAGATTGATTCAGAGCATGCATAAACAATCATGCTAACTGTACAGGCTAAAGGTGTACGGAAACACATTTCCAGCCTGAGGTTACCTTGGGACACCACCGAAAGATTTCCTGAGGTGTCATCATCTGGTGATAAATTGAAAGCATACAATGTGTAACCCTCTGCAAAATCATTTCTGTCAATAGGTAAAGAGAGATCTTTTAGATGCCTCCCGGTAGCCAGGAATAGATTGTAAAATTCTCACACAGATATGTTGTTATTAAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259583 True 310 lncRNA 0.43 1 14686204 14686513

Neighbor

gene id symbol gene type direction distance location
LOC110503699 NA coding upstream 55042 14628884 ~ 14631162 (+)
LOC110510370 LOC106605615 coding upstream 84595 14525705 ~ 14601609 (+)
proser3 LOC106577938 coding upstream 166492 14511659 ~ 14519712 (+)
si:dkey-42l23.2 cml1 coding upstream 178078 14506201 ~ 14508126 (+)
LOC110510788 ctrl coding upstream 184425 14500459 ~ 14501779 (+)
LOC110510471 LOC106577854 coding downstream 57208 14743721 ~ 14777153 (+)
LOC110510982 NA coding downstream 233086 14919599 ~ 14941872 (+)
LOC118944476 LOC106605624 coding downstream 256594 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 coding downstream 298258 14984771 ~ 14991394 (+)
LOC110510993 fxyd5a coding downstream 312163 14998676 ~ 15022578 (+)
G226889 LOC106577926 non-coding upstream 62987 14618940 ~ 14623217 (+)
G226845 LOC107675859 non-coding upstream 161690 14523181 ~ 14524514 (+)
LOC110510729 LOC106578340 non-coding upstream 215941 14468093 ~ 14471031 (+)
G226807 LOC106578340 non-coding upstream 296363 14389198 ~ 14390428 (+)
G226797 NA non-coding upstream 315126 14367459 ~ 14371078 (+)
G226935 NA non-coding downstream 3137 14689650 ~ 14689945 (+)
G226902 NA non-coding downstream 8103 14694616 ~ 14747965 (+)
G227323 NA non-coding downstream 202865 14889378 ~ 14889745 (+)
G227333 NA non-coding downstream 209520 14896033 ~ 14896321 (+)
G227354 NA non-coding downstream 229539 14916052 ~ 14916301 (+)
G226791 NA other upstream 276123 14408872 ~ 14410081 (+)
LOC110510822 smg9 other upstream 406349 14278350 ~ 14284963 (+)
G225920 NA other upstream 639356 14046586 ~ 14046848 (+)
LOC110503682 trp-iii other upstream 682278 14001152 ~ 14003950 (+)
G226941 NA other downstream 17088 14703601 ~ 14703975 (+)
G227405 NA other downstream 310646 14997159 ~ 14998075 (+)
LOC110511049 LOC106605627 other downstream 386631 15072005 ~ 15095913 (+)

Expression


Co-expression Network