G226935


Basic Information

Item Value
gene id G226935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14689650 ~ 14689945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU259587
GTCTGTGTCTTGTGCCGTCTATTCCCAGAGTTTACGGGGTAACCGAGGCTTTGCTACAAGAACTGAAGGAGGCGATCTACATCTACGAGAAACTCAAAGAAATCCGACACACCCTGATGGACGACAAAAAATACAGGGAAGCTGTGGTGGCTGATGTGATGACTTTCTGGCTCAATAAAGAGACCGAGTGACAATACATATTTGTTATTTAGATGTAACGCAATGGGTAACTATATGCATACGATGTTAGagagaataaatacattttttctttTGAGAGAACTTACAAATCATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259587 True 296 lncRNA 0.39 1 14689650 14689945

Neighbor

gene id symbol gene type direction distance location
LOC110503699 NA coding upstream 58488 14628884 ~ 14631162 (+)
LOC110510370 LOC106605615 coding upstream 88041 14525705 ~ 14601609 (+)
proser3 LOC106577938 coding upstream 169938 14511659 ~ 14519712 (+)
si:dkey-42l23.2 cml1 coding upstream 181524 14506201 ~ 14508126 (+)
LOC110510788 ctrl coding upstream 187871 14500459 ~ 14501779 (+)
LOC110510471 LOC106577854 coding downstream 53776 14743721 ~ 14777153 (+)
LOC110510982 NA coding downstream 229654 14919599 ~ 14941872 (+)
LOC118944476 LOC106605624 coding downstream 253162 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 coding downstream 294826 14984771 ~ 14991394 (+)
LOC110510993 fxyd5a coding downstream 308731 14998676 ~ 15022578 (+)
G226931 NA non-coding upstream 3137 14686204 ~ 14686513 (+)
G226889 LOC106577926 non-coding upstream 66433 14618940 ~ 14623217 (+)
G226845 LOC107675859 non-coding upstream 165136 14523181 ~ 14524514 (+)
LOC110510729 LOC106578340 non-coding upstream 219387 14468093 ~ 14471031 (+)
G226807 LOC106578340 non-coding upstream 299809 14389198 ~ 14390428 (+)
G226902 NA non-coding downstream 4671 14694616 ~ 14747965 (+)
G227323 NA non-coding downstream 199433 14889378 ~ 14889745 (+)
G227333 NA non-coding downstream 206088 14896033 ~ 14896321 (+)
G227354 NA non-coding downstream 226107 14916052 ~ 14916301 (+)
G227369 NA non-coding downstream 237563 14927508 ~ 14927748 (+)
G226791 NA other upstream 279569 14408872 ~ 14410081 (+)
LOC110510822 smg9 other upstream 409795 14278350 ~ 14284963 (+)
G225920 NA other upstream 642802 14046586 ~ 14046848 (+)
LOC110503682 trp-iii other upstream 685724 14001152 ~ 14003950 (+)
G226941 NA other downstream 13656 14703601 ~ 14703975 (+)
G227405 NA other downstream 307214 14997159 ~ 14998075 (+)
LOC110511049 LOC106605627 other downstream 383199 15072005 ~ 15095913 (+)

Expression


Co-expression Network