G227333


Basic Information

Item Value
gene id G227333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14896033 ~ 14896321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260035
aaaagtttgtacacacctactcattcaagggtttttatttatttgtactattttccacattgtagaataatagtgaagacatcaaaactatgaaataacacatattgtcacgacttctaccgaagtcggttcctctccttgttcgggtggtgttcggcggttgacatcaccggccttctagccatcactgatccatttttcatgttccttttgttttgtcttgttttcacactcACCTGGTTTCAACTCCCTAATTACATGTTGTATATTTTGCGCTACAGGTTTTCAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260035 True 289 lncRNA 0.48 1 14896033 14896321

Neighbor

gene id symbol gene type direction distance location
LOC110510471 LOC106577854 coding upstream 118880 14743721 ~ 14777153 (+)
LOC110503699 NA coding upstream 264871 14628884 ~ 14631162 (+)
LOC110510370 LOC106605615 coding upstream 294424 14525705 ~ 14601609 (+)
proser3 LOC106577938 coding upstream 376321 14511659 ~ 14519712 (+)
si:dkey-42l23.2 cml1 coding upstream 387907 14506201 ~ 14508126 (+)
LOC110510982 NA coding downstream 23278 14919599 ~ 14941872 (+)
LOC118944476 LOC106605624 coding downstream 46786 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 coding downstream 88450 14984771 ~ 14991394 (+)
LOC110510993 fxyd5a coding downstream 102355 14998676 ~ 15022578 (+)
LOC110511152 NA coding downstream 159509 15055830 ~ 15061264 (+)
G227323 NA non-coding upstream 6288 14889378 ~ 14889745 (+)
G226902 NA non-coding upstream 148068 14694616 ~ 14747965 (+)
G226935 NA non-coding upstream 206088 14689650 ~ 14689945 (+)
G226931 NA non-coding upstream 209520 14686204 ~ 14686513 (+)
G226889 LOC106577926 non-coding upstream 272816 14618940 ~ 14623217 (+)
G227354 NA non-coding downstream 19731 14916052 ~ 14916301 (+)
G227369 NA non-coding downstream 31187 14927508 ~ 14927748 (+)
G227489 NA non-coding downstream 147342 15043663 ~ 15043953 (+)
G227492 NA non-coding downstream 148626 15044947 ~ 15045254 (+)
G226941 NA other upstream 192058 14703601 ~ 14703975 (+)
G226791 NA other upstream 485952 14408872 ~ 14410081 (+)
G226807 LOC106578340 other upstream 505605 14389198 ~ 14390428 (+)
LOC110510822 smg9 other upstream 616178 14278350 ~ 14284963 (+)
G225920 NA other upstream 849185 14046586 ~ 14046848 (+)
G227405 NA other downstream 100838 14997159 ~ 14998075 (+)
LOC110511049 LOC106605627 other downstream 176823 15072005 ~ 15095913 (+)
G227606 NA other downstream 347625 15243946 ~ 15244282 (+)

Expression


Co-expression Network