G227354


Basic Information

Item Value
gene id G227354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14916052 ~ 14916301 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260056
GTACAGGCATATTGAAGATTTTCATCAGAAATGGAGGATATTCTAGTAGACTTGAAATTATATTGCTTCCGTATGTACCCACCGTCCCTAGCCTATatactccctatccctagcctatatactccctatccctagcatatatactccctatccctagcctatatactccctatccctagcctatatactccctatccctagcctatatactccctatccctagcctatatactccctatccctagcatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260056 True 250 lncRNA 0.42 1 14916052 14916301

Neighbor

gene id symbol gene type direction distance location
LOC110510471 LOC106577854 coding upstream 138899 14743721 ~ 14777153 (+)
LOC110503699 NA coding upstream 284890 14628884 ~ 14631162 (+)
LOC110510370 LOC106605615 coding upstream 314443 14525705 ~ 14601609 (+)
proser3 LOC106577938 coding upstream 396340 14511659 ~ 14519712 (+)
si:dkey-42l23.2 cml1 coding upstream 407926 14506201 ~ 14508126 (+)
LOC110510982 NA coding downstream 3298 14919599 ~ 14941872 (+)
LOC118944476 LOC106605624 coding downstream 26806 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 coding downstream 68470 14984771 ~ 14991394 (+)
LOC110510993 fxyd5a coding downstream 82375 14998676 ~ 15022578 (+)
LOC110511152 NA coding downstream 139529 15055830 ~ 15061264 (+)
G227333 NA non-coding upstream 19731 14896033 ~ 14896321 (+)
G227323 NA non-coding upstream 26307 14889378 ~ 14889745 (+)
G226902 NA non-coding upstream 168087 14694616 ~ 14747965 (+)
G226935 NA non-coding upstream 226107 14689650 ~ 14689945 (+)
G226931 NA non-coding upstream 229539 14686204 ~ 14686513 (+)
G227369 NA non-coding downstream 11207 14927508 ~ 14927748 (+)
G227489 NA non-coding downstream 127362 15043663 ~ 15043953 (+)
G227492 NA non-coding downstream 128646 15044947 ~ 15045254 (+)
LOC110511142 fxyd7 non-coding downstream 180424 15096725 ~ 15102227 (+)
G226941 NA other upstream 212077 14703601 ~ 14703975 (+)
G226791 NA other upstream 505971 14408872 ~ 14410081 (+)
G226807 LOC106578340 other upstream 525624 14389198 ~ 14390428 (+)
LOC110510822 smg9 other upstream 636197 14278350 ~ 14284963 (+)
G225920 NA other upstream 869204 14046586 ~ 14046848 (+)
G227405 NA other downstream 80858 14997159 ~ 14998075 (+)
LOC110511049 LOC106605627 other downstream 156843 15072005 ~ 15095913 (+)
G227606 NA other downstream 327645 15243946 ~ 15244282 (+)

Expression


Co-expression Network