G227369


Basic Information

Item Value
gene id G227369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14927508 ~ 14927748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260082
ctatctgcacactgcccacaaaatgaggtggaaactgagctgcacttcctaacctcctgccaaatgtatgaccatattggagacatatatttccctcagattacacagatcaacaaagaattcgaaaacaaatccaattttgataaactcccaaatCTAttgagtgaaataccacagtgtgcaatcaaagcatcaagatttgtgacctgttgccacaagtaaagcgcaaccagtgaagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260082 True 241 lncRNA 0.40 1 14927508 14927748

Neighbor

gene id symbol gene type direction distance location
LOC110510471 LOC106577854 coding upstream 150355 14743721 ~ 14777153 (+)
LOC110503699 NA coding upstream 296346 14628884 ~ 14631162 (+)
LOC110510370 LOC106605615 coding upstream 325899 14525705 ~ 14601609 (+)
proser3 LOC106577938 coding upstream 407796 14511659 ~ 14519712 (+)
si:dkey-42l23.2 cml1 coding upstream 419382 14506201 ~ 14508126 (+)
LOC118944476 LOC106605624 coding downstream 15359 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 coding downstream 57023 14984771 ~ 14991394 (+)
LOC110510993 fxyd5a coding downstream 70928 14998676 ~ 15022578 (+)
LOC110511152 NA coding downstream 128082 15055830 ~ 15061264 (+)
LOC118944484 NA coding downstream 136331 15064079 ~ 15066323 (+)
G227354 NA non-coding upstream 11207 14916052 ~ 14916301 (+)
G227333 NA non-coding upstream 31187 14896033 ~ 14896321 (+)
G227323 NA non-coding upstream 37763 14889378 ~ 14889745 (+)
G226902 NA non-coding upstream 179543 14694616 ~ 14747965 (+)
G226935 NA non-coding upstream 237563 14689650 ~ 14689945 (+)
G227489 NA non-coding downstream 115915 15043663 ~ 15043953 (+)
G227492 NA non-coding downstream 117199 15044947 ~ 15045254 (+)
LOC110511142 fxyd7 non-coding downstream 168977 15096725 ~ 15102227 (+)
tyrobp tyrobp non-coding downstream 188279 15115857 ~ 15132280 (+)
G226941 NA other upstream 223533 14703601 ~ 14703975 (+)
G226791 NA other upstream 517427 14408872 ~ 14410081 (+)
G226807 LOC106578340 other upstream 537080 14389198 ~ 14390428 (+)
LOC110510822 smg9 other upstream 647653 14278350 ~ 14284963 (+)
G225920 NA other upstream 880660 14046586 ~ 14046848 (+)
G227405 NA other downstream 69411 14997159 ~ 14998075 (+)
LOC110511049 LOC106605627 other downstream 145396 15072005 ~ 15095913 (+)
G227606 NA other downstream 316198 15243946 ~ 15244282 (+)

Expression


Co-expression Network