G227405


Basic Information

Item Value
gene id G227405
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14997159 ~ 14998075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260122
GTACAAGAGGATGTAAAAAGagagacatgcagacacacagacatggagagagatatTAAAAAagagacatgcagacacacagacatggagagagacattcAAAAGGGACATgtagacacacagacatggagagagacattaAAAAagagacatgcagacacacagacatggagagagacattaAAAAagagacatgcagacacacagacatggagagagacattaAAAAAGAGACATACAGACATGGGGAGAGACATTAAAAGagagacatgcagacacacagacatggagagagacattaAAAAAGagagacatgcagacacacagacatggagagagacattaaaaaagagacatgcagacacacagacatggagagagacattcaaaaagagacatacagacacacagacatggagagagacattcAAAAagagacatgcagacacacagacatggagagagacattcaaaaagagagacatgcagacacacagacatggagagagacattcAAAAagagacatgcagacacacagacatggagagagacattcAAAAAGAGACATgtagacacacagacatggagagagacattaAAAAagagacatgcagacacacagacatggagagagacattcaaaaagagacatacagacatgg
>TU260123
GTACAAGAGGATGTAAAAAGagagacatgcagacacacagacatggagagagacattcAAAAagagacatgcagacacacagacatggagagagacattcaaaaagagagacatgcagacacacagacatggagagagacattcAAAAagagacatgcagacacacagacatggagagagacattcAAAAAGAGACATgtagacacacagacatggagagagacattcaaaaagagacatacagacatggagagagacattcAAAAagagacatgcagacacacagacatggagagagacattcaaaaagagacatacagacatggagagagacattaAAAAagagacatgcagacacacagacatggagagagacattcaaaaagagacatacagacatgg

Function

NR:

description
PREDICTED: serine-rich adhesin for platelets

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260122 False 663 TUCP 0.41 4 14997159 14998075
TU260123 True 402 TUCP 0.56 4 14997159 14998075

Neighbor

gene id symbol gene type direction distance location
LOC110510950 LOC106605624 coding upstream 5765 14984771 ~ 14991394 (+)
LOC118944476 LOC106605624 coding upstream 13014 14942150 ~ 14984145 (+)
LOC110510982 NA coding upstream 55287 14919599 ~ 14941872 (+)
LOC110510471 LOC106577854 coding upstream 220006 14743721 ~ 14777153 (+)
LOC110503699 NA coding upstream 365997 14628884 ~ 14631162 (+)
LOC110510993 fxyd5a coding downstream 601 14998676 ~ 15022578 (+)
LOC110511152 NA coding downstream 57755 15055830 ~ 15061264 (+)
LOC118944484 NA coding downstream 66004 15064079 ~ 15066323 (+)
LOC110511049 LOC106605627 coding downstream 73930 15072005 ~ 15095913 (+)
LOC110511142 fxyd7 coding downstream 100790 15096725 ~ 15102227 (+)
G227369 NA non-coding upstream 69411 14927508 ~ 14927748 (+)
G227354 NA non-coding upstream 80858 14916052 ~ 14916301 (+)
G227333 NA non-coding upstream 100838 14896033 ~ 14896321 (+)
G227323 NA non-coding upstream 107414 14889378 ~ 14889745 (+)
G227489 NA non-coding downstream 45588 15043663 ~ 15043953 (+)
G227492 NA non-coding downstream 46872 15044947 ~ 15045254 (+)
tyrobp tyrobp non-coding downstream 117952 15115857 ~ 15132280 (+)
G227569 NA non-coding downstream 149692 15147767 ~ 15147995 (+)
G226941 NA other upstream 293184 14703601 ~ 14703975 (+)
G226791 NA other upstream 587078 14408872 ~ 14410081 (+)
G226807 LOC106578340 other upstream 606731 14389198 ~ 14390428 (+)
G227606 NA other downstream 245871 15243946 ~ 15244282 (+)
zgc:162160 LOC106605640 other downstream 690268 15672260 ~ 15697397 (+)
LOC118944532 NA other downstream 1515428 16477925 ~ 16515897 (+)
LOC110503770 LOC106605493 other downstream 1645276 16619192 ~ 16674738 (+)

Expression


Co-expression Network