G227476


Basic Information

Item Value
gene id G227476
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14997217 ~ 14998401 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260203
tgtgtgtctacatGTCTCTCTttttgaatctctctctccctgtctgtgtgtctacatGTCTCTCTttttgaatctctctctccctgtctgtgtgtctgcatgtctctTTTTTAATGTCTCTCCCCATGTCTGTATGTCTCTTTTTgaatgtctctctccatgtctgtgtgtctacATGTCCCTTTTgaatgtctctctccatgtctgtgtgtctacATGTCTCTCTttttgaatctctctctccctgactgtgtgtctgcatgtctctTTTTgaatgtctctctccatgtctgtgtgtctacATGTCCCTTTTTaatgtctctctccatgtctgtgtgtctgcatgtctctTTTTtaatgtctctctccatgtctgtgtgtctgcatgtctctTTTTtaatgtctctctccatgtctgtgtgtctacATGTCCCTTTTgaatgtctctctccatgtctgtgtgtctgcatgtctctTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260203 True 480 lncRNA 0.42 2 14997217 14998401

Neighbor

gene id symbol gene type direction distance location
LOC110510856 LOC106577793 coding downstream 163186 14780067 ~ 14834031 (-)
aplp1 LOC106577862 coding downstream 254318 14694606 ~ 14742899 (-)
zbtb32 LOC106577891 coding downstream 329717 14655864 ~ 14667500 (-)
LOC110510719 LOC106577908 coding downstream 354308 14639769 ~ 14642909 (-)
LOC110503689 tm149 coding downstream 389449 14598789 ~ 14638314 (-)
si:dkey-262k9.2 LOC106577773 coding upstream 25124 15023525 ~ 15040893 (-)
LOC118936618 LOC106605662 coding upstream 103952 15102353 ~ 15109931 (-)
LOC110511165 NA coding upstream 114434 15112835 ~ 15115841 (-)
plm plm coding upstream 160191 15158002 ~ 15171917 (-)
LOC110519917 LOC106577761 coding upstream 186417 15184818 ~ 15204146 (-)
G227472 LOC106605624 non-coding downstream 5811 14990463 ~ 14991406 (-)
G227340 NA non-coding downstream 97078 14899834 ~ 14900139 (-)
G227331 NA non-coding downstream 102672 14894249 ~ 14894545 (-)
G227207 NA non-coding downstream 282384 14714273 ~ 14714833 (-)
G227163 NA non-coding downstream 372101 14620268 ~ 14625116 (-)
G227438 fxyd5a non-coding upstream 5886 15004287 ~ 15022575 (-)
G227707 NA non-coding upstream 167226 15165627 ~ 15165998 (-)
G227717 LOC105030512 non-coding upstream 195796 15194197 ~ 15216186 (-)
G227732 NA non-coding upstream 227425 15225826 ~ 15226093 (-)
psenen LOC106577931 other downstream 472363 14519197 ~ 14524902 (-)
G227060 NA other downstream 522051 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 995409 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 1069384 13909746 ~ 13927861 (-)
LOC110512327 LOC106578554 other upstream 537964 15536363 ~ 15539677 (-)
G228094 NA other upstream 602614 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 707833 15706234 ~ 15708265 (-)
G228191 LOC106578455 other upstream 789221 15762029 ~ 15791401 (-)
G229373 LOC100194703 other upstream 1840988 16839389 ~ 16839839 (-)

Expression


Co-expression Network