G227745


Basic Information

Item Value
gene id G227745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15247511 ~ 15247974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260499
taaaacacacatgcagggtattgaattaaagctacactcgttgtgaatctagccaacaagtcagatttttaaaatgcttttcggcgaaagcatgagaagctattatctgatagcatgcaacaccccaaaatacctgaaggggacgtaaacaaaagaattagcgtagccggcgctacacaaaacgcagaaataaaatataaaacattcattacctttgatgatattctttgttggcactcctatatgtcccataaacatcacaaattggtctttttcccgattaaatccgtccatgaatgcccaaaatatccatttgtatagcctgtctgcatcaggaaaaaagctctcttccaacacgcaacgtcatgtttaaaaattatataagttgcctatattctttgacaaaacacttcaacctacttttataacccaactttaggtatttgtaaacgttaataagcgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260499 True 464 lncRNA 0.36 1 15247511 15247974

Neighbor

gene id symbol gene type direction distance location
LOC110519925 LOC106578249 coding downstream 17024 15216991 ~ 15230487 (-)
LOC110519917 LOC106577761 coding downstream 43365 15184818 ~ 15204146 (-)
plm plm coding downstream 75594 15158002 ~ 15171917 (-)
LOC110511165 NA coding downstream 131670 15112835 ~ 15115841 (-)
LOC118936618 LOC106605662 coding downstream 137580 15102353 ~ 15109931 (-)
si:dkey-65b12.6 LOC106577653 coding upstream 149699 15397673 ~ 15406356 (-)
LOC110519926 LOC106577653 coding upstream 192760 15440734 ~ 15470012 (-)
LOC110512370 NA coding upstream 268225 15516199 ~ 15525808 (-)
LOC110512327 LOC106578554 coding upstream 288389 15536363 ~ 15539677 (-)
upk1a LOC106605667 coding upstream 380463 15628437 ~ 15631725 (-)
G227744 NA non-coding downstream 994 15246312 ~ 15246517 (-)
G227742 NA non-coding downstream 3225 15244021 ~ 15244286 (-)
G227741 NA non-coding downstream 4320 15242952 ~ 15243191 (-)
G227732 NA non-coding downstream 21418 15225826 ~ 15226093 (-)
G227717 LOC105030512 non-coding downstream 31325 15194197 ~ 15216186 (-)
G227671 NA non-coding upstream 14299 15262273 ~ 15271270 (-)
G227748 NA non-coding upstream 26599 15274573 ~ 15275233 (-)
G227750 NA non-coding upstream 30178 15278152 ~ 15278365 (-)
G227770 NA non-coding upstream 78510 15326484 ~ 15327297 (-)
G227771 NA non-coding upstream 78763 15326737 ~ 15327088 (-)
LOC110503689 tm149 other downstream 610801 14598789 ~ 14638314 (-)
psenen LOC106577931 other downstream 722657 14519197 ~ 14524902 (-)
G227060 NA other downstream 772345 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 1245703 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 1319678 13909746 ~ 13927861 (-)
G228094 NA other upstream 353041 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 458260 15706234 ~ 15708265 (-)
G228191 LOC106578455 other upstream 539648 15762029 ~ 15791401 (-)
G229373 LOC100194703 other upstream 1591415 16839389 ~ 16839839 (-)

Expression


Co-expression Network