G227619


Basic Information

Item Value
gene id G227619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15281673 ~ 15281989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260364
ctcccgggtggcgcagtggttaagggcgctgtactgcagcgcaagttgtgccatcagagtccctgggttcgcgcccaggctctgtcctaaccggctgcgaccgggaggtctgtggggcgacgcacaattggcctagcgtcgtccgggttagggagggattggtcggtagggatctccttgtctcatcgcgcaccagcgactcctgtggcgggccgggatgacattcagccttcgtctctcccgagccccgTACgggagcgatgagacaagatagtagctactacaattggataccatgaaattggggagaaaaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260364 True 317 lncRNA 0.46 1 15281673 15281989

Neighbor

gene id symbol gene type direction distance location
LOC110519916 LOC106577754 coding upstream 10400 15249894 ~ 15271273 (+)
LOC110519918 LOC106578256 coding upstream 68974 15204527 ~ 15212699 (+)
LOC118944493 LOC106578274 coding upstream 140212 15138558 ~ 15141461 (+)
LOC118944490 LOC106578274 coding upstream 143317 15136772 ~ 15138356 (+)
tyrobp tyrobp coding upstream 149393 15115857 ~ 15132280 (+)
LOC110519929 LOC106577750 coding downstream 916 15282905 ~ 15298123 (+)
gapdhs LOC106577739 coding downstream 17619 15299608 ~ 15319903 (+)
LOC110519928 LOC106605633 coding downstream 38374 15320363 ~ 15324018 (+)
sult2st3 LOC106577720 coding downstream 46455 15328444 ~ 15332966 (+)
ncam3 nca11 coding downstream 90471 15372460 ~ 15390084 (+)
G227615 NA non-coding upstream 3311 15278072 ~ 15278362 (+)
G227534 NA non-coding upstream 4483 15276160 ~ 15277190 (+)
G227610 NA non-coding upstream 27694 15250931 ~ 15253979 (+)
G227609 NA non-coding upstream 33671 15247776 ~ 15248002 (+)
G227629 NA non-coding downstream 27232 15309221 ~ 15310171 (+)
G227800 NA non-coding downstream 110160 15392149 ~ 15392775 (+)
G227808 LOC106578386 non-coding downstream 114913 15396902 ~ 15441498 (+)
G227844 LOC106577653 non-coding downstream 166527 15448516 ~ 15453530 (+)
G227606 NA other upstream 37391 15243946 ~ 15244282 (+)
LOC110511049 LOC106605627 other upstream 185760 15072005 ~ 15095913 (+)
G227405 NA other upstream 283598 14997159 ~ 14998075 (+)
LOC110510950 LOC106605624 other upstream 290379 14984771 ~ 14991394 (+)
LOC118944476 LOC106605624 other upstream 306696 14942150 ~ 14984145 (+)
zgc:162160 LOC106605640 other downstream 406354 15672260 ~ 15697397 (+)
LOC118944532 NA other downstream 1231514 16477925 ~ 16515897 (+)
LOC110503770 LOC106605493 other downstream 1361362 16619192 ~ 16674738 (+)
LOC100653482 mrap2 other downstream 1512710 16794699 ~ 16801793 (+)
G230916 NA other downstream 3013365 18295354 ~ 18296105 (+)

Expression


Co-expression Network