G227771


Basic Information

Item Value
gene id G227771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15326737 ~ 15327088 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260525
GACTAGACTGGTCAACAGGTTTCTGTAAAGACTTGACTGGTCAACAGGTTTCTACAGACTAGACTGGTCAACAGGTTTCTACAGACTAGACTGGTCAACAGGTTTCTACACAGACTAGACTGGTCAACCAACAGGTTTCTACACAGACTAAACTGGTCAACATTTTTCTATACAGACTAGACTGGTCAACAGGTTTCTACAGAATAGACTGGTCAATATGTTTCTATACAGACTAGAC
>TU260526
GACTAGACTGGTCAACAGGTTTCTGTAAAGACTTGACTGGTCAACAGGTTTCTATAAAGACTAGACTGGTCAACAGGTTTCTACACAGACTAGACTGGTCAACCGGTTTCTACAGACTAGACTGGTCAACAGGTTTCTGTAAAGACTTGACTGGTCAACAGGTTTCTACAGACTAGACTGGTCAACAGGTTTCTACACAGACTAGACTGGTCAACCAACAGGTTTCTACACAGACTAAACTGGTCAACATTTTTCTATACAGACTAGACTGGTCAACAGGTTTCTACAGAATAGACTGGTCAATATGTTTCTATACAGACTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260525 False 238 lncRNA 0.44 2 15326737 15327088
TU260526 True 325 lncRNA 0.42 2 15326737 15327088

Neighbor

gene id symbol gene type direction distance location
LOC110519925 LOC106578249 coding downstream 96250 15216991 ~ 15230487 (-)
LOC110519917 LOC106577761 coding downstream 122591 15184818 ~ 15204146 (-)
plm plm coding downstream 154820 15158002 ~ 15171917 (-)
LOC110511165 NA coding downstream 210896 15112835 ~ 15115841 (-)
LOC118936618 LOC106605662 coding downstream 216806 15102353 ~ 15109931 (-)
si:dkey-65b12.6 LOC106577653 coding upstream 70585 15397673 ~ 15406356 (-)
LOC110519926 LOC106577653 coding upstream 113646 15440734 ~ 15470012 (-)
LOC110512370 NA coding upstream 189111 15516199 ~ 15525808 (-)
LOC110512327 LOC106578554 coding upstream 209275 15536363 ~ 15539677 (-)
upk1a LOC106605667 coding upstream 301349 15628437 ~ 15631725 (-)
G227750 NA non-coding downstream 48372 15278152 ~ 15278365 (-)
G227748 NA non-coding downstream 51504 15274573 ~ 15275233 (-)
G227671 NA non-coding downstream 55467 15262273 ~ 15271270 (-)
G227745 NA non-coding downstream 78763 15247511 ~ 15247974 (-)
G227744 NA non-coding downstream 80220 15246312 ~ 15246517 (-)
G227782 nca11 non-coding upstream 52867 15379955 ~ 15390413 (-)
G227799 LOC106605635 non-coding upstream 63504 15390592 ~ 15391955 (-)
G227801 NA non-coding upstream 65357 15392445 ~ 15392825 (-)
G227803 NA non-coding upstream 65974 15393062 ~ 15393338 (-)
G227880 NA non-coding upstream 146551 15473639 ~ 15473884 (-)
LOC110503689 tm149 other downstream 690027 14598789 ~ 14638314 (-)
psenen LOC106577931 other downstream 801883 14519197 ~ 14524902 (-)
G227060 NA other downstream 851571 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 1324929 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 1398904 13909746 ~ 13927861 (-)
G228094 NA other upstream 273927 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 379146 15706234 ~ 15708265 (-)
G228191 LOC106578455 other upstream 460534 15762029 ~ 15791401 (-)
G229373 LOC100194703 other upstream 1512301 16839389 ~ 16839839 (-)

Expression


Co-expression Network