Gene
RNA
| Item | Value |
|---|---|
| gene id | G227962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 15628428 ~ 15628719 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU260760 | True | 270 | lncRNA | 0.38 | 2 | 15628428 | 15628719 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arhgap33 | LOC106578439 | coding | upstream | 9329 | 15578412 ~ 15619099 (+) |
| rbm42 | LOC106578518 | coding | upstream | 50627 | 15554750 ~ 15577801 (+) |
| ncam3 | nca11 | coding | upstream | 238344 | 15372460 ~ 15390084 (+) |
| sult2st3 | LOC106577720 | coding | upstream | 295462 | 15328444 ~ 15332966 (+) |
| LOC110519928 | LOC106605633 | coding | upstream | 304410 | 15320363 ~ 15324018 (+) |
| zmp:0000000951 | LOC106578502 | coding | downstream | 3844 | 15632563 ~ 15636625 (+) |
| ppox | LOC106605668 | coding | downstream | 8017 | 15636736 ~ 15644078 (+) |
| zgc:162160 | LOC106605640 | coding | downstream | 43541 | 15672260 ~ 15697397 (+) |
| fbl | fbrl | coding | downstream | 77586 | 15706305 ~ 15710237 (+) |
| LOC110503805 | LOC106605641 | coding | downstream | 82324 | 15711043 ~ 15788655 (+) |
| G227963 | NA | non-coding | upstream | 98 | 15626464 ~ 15628330 (+) |
| G227911 | NA | non-coding | upstream | 87604 | 15540336 ~ 15540824 (+) |
| G227881 | NA | non-coding | upstream | 123043 | 15491365 ~ 15505385 (+) |
| G227846 | LOC106577653 | non-coding | upstream | 165496 | 15457908 ~ 15462932 (+) |
| G227845 | LOC106605585 | non-coding | upstream | 168798 | 15454545 ~ 15459630 (+) |
| G227971 | NA | non-coding | downstream | 23879 | 15652598 ~ 15702948 (+) |
| G228011 | NA | non-coding | downstream | 111501 | 15740220 ~ 15740681 (+) |
| G228032 | NA | non-coding | downstream | 172642 | 15801361 ~ 15801855 (+) |
| G228034 | LOC106578507 | non-coding | downstream | 186568 | 15815287 ~ 15817140 (+) |
| G227606 | NA | other | upstream | 384146 | 15243946 ~ 15244282 (+) |
| LOC110511049 | LOC106605627 | other | upstream | 532515 | 15072005 ~ 15095913 (+) |
| G227405 | NA | other | upstream | 630353 | 14997159 ~ 14998075 (+) |
| LOC110510950 | LOC106605624 | other | upstream | 637134 | 14984771 ~ 14991394 (+) |
| LOC118944476 | LOC106605624 | other | upstream | 653451 | 14942150 ~ 14984145 (+) |
| LOC118944532 | NA | other | downstream | 884784 | 16477925 ~ 16515897 (+) |
| LOC110503770 | LOC106605493 | other | downstream | 1014632 | 16619192 ~ 16674738 (+) |
| LOC100653482 | mrap2 | other | downstream | 1165980 | 16794699 ~ 16801793 (+) |
| G230916 | NA | other | downstream | 2666635 | 18295354 ~ 18296105 (+) |
