G227971


Basic Information

Item Value
gene id G227971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15652598 ~ 15702948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU260770
atctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcataattagtcatttaggtcaacattgtatcattcagagatcctcactgaacttctggagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260770 True 226 lncRNA 0.41 2 15652598 15702948

Neighbor

gene id symbol gene type direction distance location
ppox LOC106605668 coding upstream 8520 15636736 ~ 15644078 (+)
zmp:0000000951 LOC106578502 coding upstream 15973 15632563 ~ 15636625 (+)
arhgap33 LOC106578439 coding upstream 33499 15578412 ~ 15619099 (+)
rbm42 LOC106578518 coding upstream 74797 15554750 ~ 15577801 (+)
ncam3 nca11 coding upstream 262514 15372460 ~ 15390084 (+)
fbl fbrl coding downstream 3357 15706305 ~ 15710237 (+)
LOC110503805 LOC106605641 coding downstream 8095 15711043 ~ 15788655 (+)
zp3d.1 LOC106605642 coding downstream 88896 15791844 ~ 15795523 (+)
LOC110512192 LOC106578478 coding downstream 95997 15798945 ~ 15801186 (+)
LOC110512168 LOC106578482 coding downstream 127885 15830833 ~ 15844953 (+)
G227962 NA non-coding upstream 23879 15628428 ~ 15628719 (+)
G227963 NA non-coding upstream 24268 15626464 ~ 15628330 (+)
G227911 NA non-coding upstream 111774 15540336 ~ 15540824 (+)
G227881 NA non-coding upstream 147213 15491365 ~ 15505385 (+)
G227846 LOC106577653 non-coding upstream 189666 15457908 ~ 15462932 (+)
G228011 NA non-coding downstream 37272 15740220 ~ 15740681 (+)
G228032 NA non-coding downstream 98413 15801361 ~ 15801855 (+)
G228034 LOC106578507 non-coding downstream 112339 15815287 ~ 15817140 (+)
G228223 NA non-coding downstream 122356 15825304 ~ 15825708 (+)
G227606 NA other upstream 408316 15243946 ~ 15244282 (+)
LOC110511049 LOC106605627 other upstream 556685 15072005 ~ 15095913 (+)
G227405 NA other upstream 654523 14997159 ~ 14998075 (+)
LOC110510950 LOC106605624 other upstream 661304 14984771 ~ 14991394 (+)
LOC118944476 LOC106605624 other upstream 677621 14942150 ~ 14984145 (+)
LOC118944532 NA other downstream 810555 16477925 ~ 16515897 (+)
LOC110503770 LOC106605493 other downstream 940403 16619192 ~ 16674738 (+)
LOC100653482 mrap2 other downstream 1091751 16794699 ~ 16801793 (+)
G230916 NA other downstream 2592406 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 2867061 18569698 ~ 18588248 (+)

Expression


Co-expression Network