G228166



Basic Information


Item Value
gene id G228166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15734167 ~ 15734374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU261001
ctgattaatcggtcgacctctagtagaggATGCATCGATTCCTCTGACGAAGTCCCTAAAAATTTTAAAAGaccccagccatagactgttctctctactaccgcatggcaagcggtaccagagtgccaagtctaggacaaaaaggtttctcaacagtttttacccctaagccataagactcctgtacaggtaatcaaatggctacccg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU261001 True 208 lncRNA 0.46 1 15734167 15734374

Neighbor


gene id symbol gene type direction distance location
LOC118946067 NA coding downstream 49113 15683972 ~ 15685054 (-)
upk1a LOC106605667 coding downstream 102442 15628437 ~ 15631725 (-)
LOC110512327 LOC106578554 coding downstream 194490 15536363 ~ 15539677 (-)
LOC110512370 NA coding downstream 208359 15516199 ~ 15525808 (-)
LOC110519926 LOC106577653 coding downstream 264155 15440734 ~ 15470012 (-)
LOC110503794 LOC106578507 coding upstream 66985 15801359 ~ 15817153 (-)
LOC110503786 telt coding upstream 89704 15824078 ~ 15830026 (-)
LOC110512120 LOC106605647 coding upstream 118857 15853231 ~ 15861569 (-)
LOC110503781 LOC106605653 coding upstream 166524 15900898 ~ 15912729 (-)
LOC118944492 NA coding upstream 198444 15932818 ~ 15935521 (-)
G228163 NA non-coding downstream 2701 15731178 ~ 15731466 (-)
G228162 NA non-coding downstream 3043 15730760 ~ 15731124 (-)
G228160 NA non-coding downstream 5556 15728277 ~ 15728611 (-)
G228159 NA non-coding downstream 6038 15727911 ~ 15728129 (-)
G228158 NA non-coding downstream 6824 15727099 ~ 15727343 (-)
G228167 NA non-coding upstream 799 15735173 ~ 15735376 (-)
G228168 NA non-coding upstream 3334 15737708 ~ 15738366 (-)
G228169 NA non-coding upstream 4024 15738398 ~ 15738828 (-)
G228173 NA non-coding upstream 10112 15744486 ~ 15744759 (-)
G228177 NA non-coding upstream 13346 15747720 ~ 15747968 (-)
G228098 fbrl other downstream 25902 15706234 ~ 15708265 (-)
G228094 NA other downstream 132679 15601015 ~ 15601488 (-)
LOC110503689 tm149 other downstream 1097457 14598789 ~ 14638314 (-)
psenen LOC106577931 other downstream 1209313 14519197 ~ 14524902 (-)
G228191 LOC106578455 other upstream 53248 15762029 ~ 15791401 (-)
G229373 LOC100194703 other upstream 1105015 16839389 ~ 16839839 (-)
G229380 LOC106605502 other upstream 1115598 16849972 ~ 16850199 (-)
G229707 NA other upstream 1310651 17043792 ~ 17048344 (-)
LOC110505118 LOC106579600 other upstream 2240871 17975160 ~ 17985544 (-)

Expression



Co-expression Network