G228414


Basic Information

Item Value
gene id G228414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16166023 ~ 16166365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU261287
ctctggagtgatgaatcatgcttcaccatctggtcaGTCTGATGGATGAATGTGGGTTTATCAGATGCtaggagaaagctacctgccccaatgcatattgCATATtgacccttagttccagtgaagggaaatcttaatgctacagcatacaatgacattctagacgattctgtgtttccaactttgtggaaacagtttggggaaggctctttcctgtttcagcatgacaatgccctgtgcacaaagcaaggtccatacagtaatggtttgtcaagattggtgtggaagaacttgactggccttcacagagtcctgaccttaaCTCCATCGAACatgtttggga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261287 True 343 lncRNA 0.44 1 16166023 16166365

Neighbor

gene id symbol gene type direction distance location
hace1 hace1 coding upstream 192680 15939449 ~ 15973343 (+)
bves LOC106578487 coding upstream 267813 15889119 ~ 15898210 (+)
LOC110512064 LOC106578487 coding upstream 277308 15886025 ~ 15888715 (+)
LOC110512078 stx12 coding upstream 287501 15867255 ~ 15878522 (+)
LOC110512109 LOC106605649 coding upstream 301570 15861619 ~ 15864453 (+)
LOC118946091 LOC106605491 coding downstream 291354 16457719 ~ 16476369 (+)
LOC118944532 NA coding downstream 311560 16477925 ~ 16515897 (+)
LOC118946105 LOC106605491 coding downstream 385070 16551435 ~ 16575223 (+)
LOC118936471 NA coding downstream 425789 16592154 ~ 16598002 (+)
LOC110503770 LOC106605493 coding downstream 452827 16619192 ~ 16674738 (+)
G228223 NA non-coding upstream 340315 15825304 ~ 15825708 (+)
G228034 LOC106578507 non-coding upstream 348883 15815287 ~ 15817140 (+)
G228032 NA non-coding upstream 364168 15801361 ~ 15801855 (+)
G228011 NA non-coding upstream 425342 15740220 ~ 15740681 (+)
LOC110503805 LOC106605641 non-coding upstream 453904 15711043 ~ 15788655 (+)
G228451 NA non-coding downstream 60541 16226906 ~ 16229345 (+)
G228707 NA non-coding downstream 525179 16691544 ~ 16693504 (+)
G228711 NA non-coding downstream 536287 16702652 ~ 16702864 (+)
G228715 NA non-coding downstream 540794 16707159 ~ 16734495 (+)
G228722 NA non-coding downstream 544545 16710910 ~ 16711817 (+)
zgc:162160 LOC106605640 other upstream 469379 15672260 ~ 15697397 (+)
G227606 NA other upstream 921741 15243946 ~ 15244282 (+)
LOC110511049 LOC106605627 other upstream 1070110 15072005 ~ 15095913 (+)
G227405 NA other upstream 1167948 14997159 ~ 14998075 (+)
LOC110510950 LOC106605624 other upstream 1174729 14984771 ~ 14991394 (+)
LOC100653482 mrap2 other downstream 628334 16794699 ~ 16801793 (+)
G230916 NA other downstream 2128989 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 2403644 18569698 ~ 18588248 (+)

Expression


Co-expression Network