G229428


Basic Information

Item Value
gene id G229428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16890021 ~ 16890258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262441
gggtagtctagtggttagagcattgggccagtaaccgaaaggctgctggatcaaatccctgagctgacaaggtaaaaatctgtcgttctgcccctgaacaaggcagttaacccactgttcccctgtaggccgtcactgtaaataggaatttgttcttaacttacttgcctagttaaatgaaggttaaattcATGAATTGGATGAAGCACATGTATTCTCCCAGGGCAGTCTATAATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU262441 True 238 lncRNA 0.44 1 16890021 16890258

Neighbor

gene id symbol gene type direction distance location
LOC100653482 mrap2 coding upstream 88228 16794699 ~ 16801793 (+)
LOC110511998 LOC106579451 coding upstream 102794 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 189187 16678893 ~ 16700834 (+)
LOC110503770 LOC106605493 coding upstream 215283 16619192 ~ 16674738 (+)
LOC118936471 NA coding upstream 292019 16592154 ~ 16598002 (+)
LOC110503758 LOC106605505 coding downstream 332324 17222582 ~ 17341150 (+)
LOC110505127 NA coding downstream 466516 17356774 ~ 17359570 (+)
LOC110511964 LOC106605506 coding downstream 572705 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 593950 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 829479 17719737 ~ 17723597 (+)
G228793 LOC106605502 non-coding upstream 39831 16849976 ~ 16850190 (+)
G228752 NA non-coding upstream 127670 16762121 ~ 16762351 (+)
G228715 NA non-coding upstream 155526 16707159 ~ 16734495 (+)
G228722 NA non-coding upstream 178204 16710910 ~ 16711817 (+)
G229430 NA non-coding downstream 3050 16893308 ~ 16896967 (+)
G229431 NA non-coding downstream 5525 16895783 ~ 16897635 (+)
G229433 NA non-coding downstream 7568 16897826 ~ 16898546 (+)
G229448 NA non-coding downstream 14331 16904589 ~ 16904979 (+)
G229449 NA non-coding downstream 15089 16905347 ~ 16905589 (+)
LOC118944532 NA other upstream 374128 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1193377 15672260 ~ 15697397 (+)
G227606 NA other upstream 1645739 15243946 ~ 15244282 (+)
G230916 NA other downstream 1405096 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1679751 18569698 ~ 18588248 (+)
G231438 NA other downstream 1960991 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 2336108 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 2936872 19821356 ~ 19844652 (+)

Expression


Co-expression Network