G229448


Basic Information

Item Value
gene id G229448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16904589 ~ 16904979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262465
TGTTCTGGCAGTCTTTCCTAGTCTaactgcctctctcgctctctgaatttaattcaattcaagggcttgattggcatgggaaacatgttaacattgccaaagccagTGAAGTAgatacagtgccatgcgaaagtattcagcccccttgaactttgcaaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaactttttcaacaaatcaaaaactgaaaaattgggcgtgcaaaatgattcagcccccttaagttaatactttgtagcgtcaccttttgctgcgattacagctgtaagtcgcttgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262465 True 391 lncRNA 0.38 1 16904589 16904979

Neighbor

gene id symbol gene type direction distance location
LOC100653482 mrap2 coding upstream 102796 16794699 ~ 16801793 (+)
LOC110511998 LOC106579451 coding upstream 117362 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 203755 16678893 ~ 16700834 (+)
LOC110503770 LOC106605493 coding upstream 229851 16619192 ~ 16674738 (+)
LOC118936471 NA coding upstream 306587 16592154 ~ 16598002 (+)
LOC110503758 LOC106605505 coding downstream 317603 17222582 ~ 17341150 (+)
LOC110505127 NA coding downstream 451795 17356774 ~ 17359570 (+)
LOC110511964 LOC106605506 coding downstream 557984 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 579229 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 814758 17719737 ~ 17723597 (+)
G229433 NA non-coding upstream 6043 16897826 ~ 16898546 (+)
G229431 NA non-coding upstream 6954 16895783 ~ 16897635 (+)
G229430 NA non-coding upstream 7622 16893308 ~ 16896967 (+)
G229428 NA non-coding upstream 14331 16890021 ~ 16890258 (+)
G228793 LOC106605502 non-coding upstream 54399 16849976 ~ 16850190 (+)
G229449 NA non-coding downstream 368 16905347 ~ 16905589 (+)
G229471 NA non-coding downstream 22417 16927396 ~ 16928025 (+)
G229490 NA non-coding downstream 38533 16943512 ~ 16943757 (+)
G229520 NA non-coding downstream 73237 16978216 ~ 16983150 (+)
G229543 NA non-coding downstream 112287 17017266 ~ 17017562 (+)
LOC118944532 NA other upstream 388696 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1207945 15672260 ~ 15697397 (+)
G227606 NA other upstream 1660307 15243946 ~ 15244282 (+)
G230916 NA other downstream 1390375 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1665030 18569698 ~ 18588248 (+)
G231438 NA other downstream 1946270 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 2321387 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 2922151 19821356 ~ 19844652 (+)

Expression


Co-expression Network