G229707


Basic Information

Item Value
gene id G229707
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17043792 ~ 17048344 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262745
atgtatttttttttgtttcttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaattggcaggtaccatcacgaatttgtcatgctcaaaaaattttagatgtatttttttttgtttcttactttttcaaagtcactgtgcatttgcaatatgttttaatgggcaggtaccatcacgaatttgtcatgctataaaaatcctg
>TU262746
atgtatttttttttgtttcttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaattggcaggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgttttcttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatg
>TU262748
gcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaaaattttagatgtatttttttttgtttcttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaattggcaggtaccatcacgaatttgtcatgctcaaaaaatttttgatgtatttttttttgtttccttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262745 False 296 lncRNA 0.31 2 17043792 17045411
TU262746 False 345 lncRNA 0.30 2 17044695 17045411
TU262748 True 540 TUCP 0.32 2 17045025 17048344

Neighbor

gene id symbol gene type direction distance location
cep162 cep162 coding downstream 217682 16805002 ~ 16826110 (-)
LOC110512031 grik2 coding downstream 621815 16187381 ~ 16421977 (-)
LOC118946082 NA coding downstream 1078347 15965041 ~ 15965445 (-)
LOC118944492 NA coding downstream 1108348 15932818 ~ 15935521 (-)
LOC110503781 LOC106605653 coding downstream 1131063 15900898 ~ 15912729 (-)
LOC110503762 LOC106605503 coding upstream 30102 17075513 ~ 17188347 (-)
LOC118946294 NA coding upstream 57054 17102465 ~ 17105382 (-)
LOC110511923 LOC106579390 coding upstream 895107 17940518 ~ 17947436 (-)
LOC110511898 LOC106579390 coding upstream 911837 17957248 ~ 17964878 (-)
LOC110511884 cg024 coding upstream 922598 17968009 ~ 17969851 (-)
G229705 NA non-coding downstream 872 17041094 ~ 17042920 (-)
G229704 NA non-coding downstream 2957 17040091 ~ 17040835 (-)
G229687 NA non-coding downstream 22099 17021285 ~ 17021693 (-)
G229686 NA non-coding downstream 22990 17020572 ~ 17020802 (-)
G229685 NA non-coding downstream 23407 17019996 ~ 17020385 (-)
G229709 NA non-coding upstream 52 17045463 ~ 17046319 (-)
G229777 NA non-coding upstream 145540 17190951 ~ 17191207 (-)
G229901 NA non-coding upstream 203305 17248716 ~ 17249318 (-)
G229964 NA non-coding upstream 293907 17339318 ~ 17341083 (-)
G229969 NA non-coding upstream 303631 17349042 ~ 17349266 (-)
G229380 LOC106605502 other downstream 193593 16849972 ~ 16850199 (-)
G229373 LOC100194703 other downstream 203953 16839389 ~ 16839839 (-)
G228191 LOC106578455 other downstream 1252627 15762029 ~ 15791401 (-)
G228098 fbrl other downstream 1335527 15706234 ~ 15708265 (-)
G228094 NA other downstream 1442304 15601015 ~ 15601488 (-)
LOC110505118 LOC106579600 other upstream 929834 17975160 ~ 17985544 (-)
LOC110503747 lars2 other upstream 1048345 18093704 ~ 18154474 (-)
G231652 rn146 other upstream 1554319 18599730 ~ 18601875 (-)
LOC110511176 LOC106579058 other upstream 2113889 19065512 ~ 19282368 (-)
rims2a LOC106579570 other upstream 2496691 19416054 ~ 19652601 (-)
G229976 NA non-coding upstream 313573 17361917 ~ 17362226 (-)

Expression


Co-expression Network