G229572


Basic Information

Item Value
gene id G229572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17056441 ~ 17056797 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262595
cctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctaggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaatacatttgatttgatttgagttgataCATATGAGACGGGGGATGCAATATTTACAAACAAATAAAGTGACTAAGATATCGTAGAATAGTATTGAGTACAgtttacacatatgagatgagtaatgcaagatatggagacattattaaagtggctagtgttccatttataaaagtggccagtgattccaaatCTATGTCTATATGC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262595 True 357 lncRNA 0.38 1 17056441 17056797

Neighbor

gene id symbol gene type direction distance location
LOC100653482 mrap2 coding upstream 254648 16794699 ~ 16801793 (+)
LOC110511998 LOC106579451 coding upstream 269214 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 355607 16678893 ~ 16700834 (+)
LOC110503770 LOC106605493 coding upstream 381703 16619192 ~ 16674738 (+)
LOC118936471 NA coding upstream 458439 16592154 ~ 16598002 (+)
LOC110503758 LOC106605505 coding downstream 165785 17222582 ~ 17341150 (+)
LOC110505127 NA coding downstream 299977 17356774 ~ 17359570 (+)
LOC110511964 LOC106605506 coding downstream 406166 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 427411 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 662940 17719737 ~ 17723597 (+)
G229543 NA non-coding upstream 38879 17017266 ~ 17017562 (+)
G229520 NA non-coding upstream 73291 16978216 ~ 16983150 (+)
G229490 NA non-coding upstream 112684 16943512 ~ 16943757 (+)
G229471 NA non-coding upstream 128416 16927396 ~ 16928025 (+)
G229449 NA non-coding upstream 150852 16905347 ~ 16905589 (+)
G229577 NA non-coding downstream 4427 17061224 ~ 17061428 (+)
G229578 NA non-coding downstream 6686 17063483 ~ 17063761 (+)
G229581 NA non-coding downstream 16068 17072865 ~ 17073074 (+)
G229538 NA non-coding downstream 18753 17075550 ~ 17077677 (+)
G229776 NA non-coding downstream 134008 17190805 ~ 17191017 (+)
LOC118944532 NA other upstream 540548 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1359797 15672260 ~ 15697397 (+)
G227606 NA other upstream 1812159 15243946 ~ 15244282 (+)
G230916 NA other downstream 1238557 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1513212 18569698 ~ 18588248 (+)
G231438 NA other downstream 1794452 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 2169569 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 2770333 19821356 ~ 19844652 (+)

Expression


Co-expression Network