G229538


Basic Information

Item Value
gene id G229538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17075550 ~ 17077677 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262558
ACACATTCATTTTGTGCTCTGAAAACTGTACATTAACAAAGAGTCAACCCCTGTGAACTAAAAAGGTGGAGGGGCGGTGGAGGTTAAAGGTCAGGGGACAGAGGTCAGGGttcatgtcagacaggtacagaTCTGAGGAGGGAGTGACAGTCAGTGATACCAAAACACACACTGTTACATGGAGTTACAGAACACTCATATTCCAGTACCCTGAAAAGGATGGGAGGGGAATCATAATATGTGttcgaaatggcaccctattccctatatagcgcactacttttaaccTGGTGTTAATTCCTGTCATTTgacctggtcaaaagcagtgcactacatagggaatagggtgccatttcggacgcaGATGTAATCTGAATAATCATGGTCATAATTATAATAATGACAACAATAATCCCCAAGCACAGTAAGAAAGATATTTATAGGCTAAAATTCATTCTGTAGAACTCTGTTGAAGTAATTACATTGCTGTACAACAGGACTCCAAAAGAGCCTTGTGCTTTCTCTGTGTGCAACTAATCCTAACCCCATACTGCAGAGTCACAACCTCTGTCATGTCCTATACAGTATTtatcatatatatttttatatttattcatTTCCATTGTCAATATTAAGCATAATTCTTTATATACTTTGTGACATGAGTGTCCTTCATTTTTTACCACCTGCATTTGCTGAACAAGCAGAATAAAATTTGCCACAAATGTACCAAGCCTGCTCGTACATCAAGCAATCAGTCAACCAATCAAAACAGTGTCTCCTTGGCTTCTGCTGAGGTCATAGAGGCTTCCACCAATGAGATATGGCCATCTTGGCTTTCAGTCATGTCATTAAGGGCATCCGCAAATGAGATATCTCATTCTTGTTGGTCTATGCTGATGTCACTATGGTACCCACCAATGGAAGGGTTTTCCACCCTTTTGGCTGGCTGATGTCATCGATCTGCTCCCTTCCTGTCAAGGGGGTGTGGACTCTGTCTGACAGTGCAGTGGAGGGTGGGGCGGGGCTCTTAGTTGGCATGGAGAGGCACATGGTTATGGTCCAGCAGTCTGCCTCCTCCACTGCCTAGGCGTGTTTGGGACATGTACTGGACATGTAGTTTGGTTggaacatgtactgtatgttgggtGAAGGTCTTGTCCAGACCAGGTCCATTGCCTAAAGGCTTGGTTGGAACATGAACTGTATGGCTGGTCCAGGTGATCTGTTAGCAGGCTGGTGAAGAGTCCATAGGCAGTTGCAGTCTGTCCTTTTAACCTACACTACCTACACCACCCAACTGCCAAACTGGCTAACCCTCCACAGAGATCtaccaggaggagagagggactcaAGTATGTGTCCAGTGAAGTAATAATGTGGATAATAACAGACCAGATATATGACTGTCTGACATAGTAAACAAAAAACTGATTCCAGCAGCAATAAGAACATATAACAAAATGCACTGCAAACCTGTTCTCTTCCCCCCCATTTAACAGGcaattcttctctctctctctctctctctctctctccctctctctctttctgtatgtcTTCCCATTTTCTCATTCTCTTAGTTGGGTCCTAACATAAaggagcttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcactcacccctGCCCGTTTCGTTGGTCATTAATCATTTGGTCGTTGGTTCTCAGAGTGAGATTGAGACGTGGAGCTTCGGGAAGggaaggtgtctgtctgtctgagagctGGGCTGGGGGACGGGGTTGGctgctctctctccgtctgtctctctgtctcagtctcacaCCTCTGTCTGCAGGTCCATGAGCTCCTGTCCCACCAGAGGGATGGTGGCGCTGGCCTTCTCCCACTCCACGTTCTGCAGCTCCAGGGGAGAGGCCGCCAAGGGCTCCAGGTCCTTCCTCATCCACGACGGGGGAGATTGGGTCTTCCTGATGCCCTCCCAGGCTCTCTTACTGGGTGTCTGCTGCTTG

Function

NR:

description
brain-specific angiogenesis inhibitor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262558 True 2026 lncRNA 0.47 2 17075550 17077677

Neighbor

gene id symbol gene type direction distance location
LOC100653482 mrap2 coding upstream 273757 16794699 ~ 16801793 (+)
LOC110511998 LOC106579451 coding upstream 288323 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 374716 16678893 ~ 16700834 (+)
LOC110503770 LOC106605493 coding upstream 400812 16619192 ~ 16674738 (+)
LOC118936471 NA coding upstream 477548 16592154 ~ 16598002 (+)
LOC110503758 LOC106605505 coding downstream 144905 17222582 ~ 17341150 (+)
LOC110505127 NA coding downstream 279097 17356774 ~ 17359570 (+)
LOC110511964 LOC106605506 coding downstream 385286 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 406531 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 642060 17719737 ~ 17723597 (+)
G229581 NA non-coding upstream 2476 17072865 ~ 17073074 (+)
G229578 NA non-coding upstream 11789 17063483 ~ 17063761 (+)
G229577 NA non-coding upstream 14122 17061224 ~ 17061428 (+)
G229572 NA non-coding upstream 18753 17056441 ~ 17056797 (+)
G229543 NA non-coding upstream 57988 17017266 ~ 17017562 (+)
G229776 NA non-coding downstream 113128 17190805 ~ 17191017 (+)
G229778 NA non-coding downstream 114022 17191699 ~ 17191909 (+)
G229868 NA non-coding downstream 270692 17348369 ~ 17348746 (+)
G229870 NA non-coding downstream 273484 17351161 ~ 17351374 (+)
LOC118944532 NA other upstream 559657 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1378906 15672260 ~ 15697397 (+)
G227606 NA other upstream 1831268 15243946 ~ 15244282 (+)
G230916 NA other downstream 1217677 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1492332 18569698 ~ 18588248 (+)
G231438 NA other downstream 1773572 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 2148689 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 2749453 19821356 ~ 19844652 (+)

Expression


Co-expression Network