G229778


Basic Information

Item Value
gene id G229778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17191699 ~ 17191909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262819
CTATTAATGTGTTGTTGATGTAGTTTCCATGTATATGATCTCACTGCATCTCCAGCCTACCTTTTCATGATGTGATCTCACTGCATCTCCAGCCTACCTTTCCATGATGTGATCTCAATGCATCTCCAGCCTACCTTTTCATGATGTGATCTCACTGCATCTCCAGCCTACCTTTCCATGATGTGATCTCAATGCATCTCCAGCCTACCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262819 True 211 lncRNA 0.44 1 17191699 17191909

Neighbor

gene id symbol gene type direction distance location
LOC100653482 mrap2 coding upstream 389906 16794699 ~ 16801793 (+)
LOC110511998 LOC106579451 coding upstream 404472 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 490865 16678893 ~ 16700834 (+)
LOC110503770 LOC106605493 coding upstream 516961 16619192 ~ 16674738 (+)
LOC118936471 NA coding upstream 593697 16592154 ~ 16598002 (+)
LOC110503758 LOC106605505 coding downstream 30673 17222582 ~ 17341150 (+)
LOC110505127 NA coding downstream 164865 17356774 ~ 17359570 (+)
LOC110511964 LOC106605506 coding downstream 271054 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 292299 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 527828 17719737 ~ 17723597 (+)
G229776 NA non-coding upstream 682 17190805 ~ 17191017 (+)
G229538 NA non-coding upstream 114022 17075550 ~ 17077677 (+)
G229581 NA non-coding upstream 118625 17072865 ~ 17073074 (+)
G229578 NA non-coding upstream 127938 17063483 ~ 17063761 (+)
G229577 NA non-coding upstream 130271 17061224 ~ 17061428 (+)
G229868 NA non-coding downstream 156460 17348369 ~ 17348746 (+)
G229870 NA non-coding downstream 159252 17351161 ~ 17351374 (+)
G229874 NA non-coding downstream 169441 17361350 ~ 17361571 (+)
G230105 NA non-coding downstream 286978 17478887 ~ 17479161 (+)
LOC118944532 NA other upstream 675806 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1495055 15672260 ~ 15697397 (+)
G227606 NA other upstream 1947417 15243946 ~ 15244282 (+)
G230916 NA other downstream 1103445 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1378100 18569698 ~ 18588248 (+)
G231438 NA other downstream 1659340 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 2034457 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 2635221 19821356 ~ 19844652 (+)

Expression


Co-expression Network