G229868


Basic Information

Item Value
gene id G229868
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17348369 ~ 17348746 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262912
acctcaatcagcctgactaaccggtgtctgtatgtagcctcgctactttatagcctcgctactgaatatagtctgtctttttactgttgttttatttctttactcacctattgttcacctaacaccttttttgcgctattggttagagcctgtaagtaagcatttcactgtaaggtctacagctgttgtattcggcgcatgtgataaattAACTTCGATTAATTTGATTTGGTTAGAGCCAAttggtgctgttctgtgaagggagtagttcaCAGCGTTATATGAGATATTACGTTTCTTGgccatttctcacatggaataaccttcatttctcagaacaataatagactgacgagtttcagaagaaaggtctttgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262912 True 378 lncRNA 0.39 1 17348369 17348746

Neighbor

gene id symbol gene type direction distance location
LOC110503758 LOC106605505 coding upstream 7219 17222582 ~ 17341150 (+)
LOC100653482 mrap2 coding upstream 546576 16794699 ~ 16801793 (+)
LOC110511998 LOC106579451 coding upstream 561142 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 647535 16678893 ~ 16700834 (+)
LOC110503770 LOC106605493 coding upstream 673631 16619192 ~ 16674738 (+)
LOC110505127 NA coding downstream 8028 17356774 ~ 17359570 (+)
LOC110511964 LOC106605506 coding downstream 114217 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 135462 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 370991 17719737 ~ 17723597 (+)
LOC110511937 LOC106579397 coding downstream 509530 17858276 ~ 17938416 (+)
G229778 NA non-coding upstream 156460 17191699 ~ 17191909 (+)
G229776 NA non-coding upstream 157352 17190805 ~ 17191017 (+)
G229538 NA non-coding upstream 270692 17075550 ~ 17077677 (+)
G229581 NA non-coding upstream 275295 17072865 ~ 17073074 (+)
G229870 NA non-coding downstream 2415 17351161 ~ 17351374 (+)
G229874 NA non-coding downstream 12604 17361350 ~ 17361571 (+)
G230105 NA non-coding downstream 130141 17478887 ~ 17479161 (+)
G230138 NA non-coding downstream 169880 17518626 ~ 17518928 (+)
G230246 NA non-coding downstream 359472 17708218 ~ 17708896 (+)
LOC118944532 NA other upstream 832476 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1651725 15672260 ~ 15697397 (+)
G227606 NA other upstream 2104087 15243946 ~ 15244282 (+)
G230916 NA other downstream 946608 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1221263 18569698 ~ 18588248 (+)
G231438 NA other downstream 1502503 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 1877620 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 2478384 19821356 ~ 19844652 (+)

Expression


Co-expression Network