Gene
RNA
| Item | Value |
|---|---|
| gene id | G229870 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 17351161 ~ 17351374 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU262914 | True | 214 | lncRNA | 0.33 | 1 | 17351161 | 17351374 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503758 | LOC106605505 | coding | upstream | 10011 | 17222582 ~ 17341150 (+) |
| LOC100653482 | mrap2 | coding | upstream | 549368 | 16794699 ~ 16801793 (+) |
| LOC110511998 | LOC106579451 | coding | upstream | 563934 | 16760501 ~ 16787229 (+) |
| sim1a | LOC106579462 | coding | upstream | 650327 | 16678893 ~ 16700834 (+) |
| LOC110503770 | LOC106605493 | coding | upstream | 676423 | 16619192 ~ 16674738 (+) |
| LOC110505127 | NA | coding | downstream | 5400 | 17356774 ~ 17359570 (+) |
| LOC110511964 | LOC106605506 | coding | downstream | 111589 | 17462963 ~ 17476591 (+) |
| LOC110503753 | LOC106579405 | coding | downstream | 132834 | 17484208 ~ 17717455 (+) |
| LOC110511951 | LOC106605515 | coding | downstream | 368363 | 17719737 ~ 17723597 (+) |
| LOC110511937 | LOC106579397 | coding | downstream | 506902 | 17858276 ~ 17938416 (+) |
| G229868 | NA | non-coding | upstream | 2415 | 17348369 ~ 17348746 (+) |
| G229778 | NA | non-coding | upstream | 159252 | 17191699 ~ 17191909 (+) |
| G229776 | NA | non-coding | upstream | 160144 | 17190805 ~ 17191017 (+) |
| G229538 | NA | non-coding | upstream | 273484 | 17075550 ~ 17077677 (+) |
| G229874 | NA | non-coding | downstream | 9976 | 17361350 ~ 17361571 (+) |
| G230105 | NA | non-coding | downstream | 127513 | 17478887 ~ 17479161 (+) |
| G230138 | NA | non-coding | downstream | 167252 | 17518626 ~ 17518928 (+) |
| G230246 | NA | non-coding | downstream | 356844 | 17708218 ~ 17708896 (+) |
| G230288 | NA | non-coding | downstream | 431559 | 17782933 ~ 17785805 (+) |
| LOC118944532 | NA | other | upstream | 835268 | 16477925 ~ 16515897 (+) |
| zgc:162160 | LOC106605640 | other | upstream | 1654517 | 15672260 ~ 15697397 (+) |
| G227606 | NA | other | upstream | 2106879 | 15243946 ~ 15244282 (+) |
| G230916 | NA | other | downstream | 943980 | 18295354 ~ 18296105 (+) |
| LOC110511593 | LOC106579240 | other | downstream | 1218635 | 18569698 ~ 18588248 (+) |
| G231438 | NA | other | downstream | 1499875 | 18851249 ~ 18851982 (+) |
| G231983 | LOC106597055 | other | downstream | 1874992 | 19226366 ~ 19234295 (+) |
| LOC110512505 | LOC106579702 | other | downstream | 2475756 | 19821356 ~ 19844652 (+) |
