G229874


Basic Information

Item Value
gene id G229874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17361350 ~ 17361571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262919
ATCATAATGTATTTATAATGAGCACGTCCCATCATTGGTTAGAATGAGATTTCATAAATCATGATGCTGTCCACGATTCGAACTCCGGTTGTTTTATTAAAAGGGGAATGCGTTACCATCGCACCAAACAGTGCTTCTGATAAACATCGTTAAAGGTACTTATTATATATATTGAGCACCTACCCGCTACTGATGTTAGCTTTAAACAATTTATAATCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262919 True 222 lncRNA 0.56 1 17361350 17361571

Neighbor

gene id symbol gene type direction distance location
LOC110505127 NA coding upstream 1780 17356774 ~ 17359570 (+)
LOC110503758 LOC106605505 coding upstream 20200 17222582 ~ 17341150 (+)
LOC100653482 mrap2 coding upstream 559557 16794699 ~ 16801793 (+)
LOC110511998 LOC106579451 coding upstream 574123 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 660516 16678893 ~ 16700834 (+)
LOC110511964 LOC106605506 coding downstream 101392 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 122637 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 358166 17719737 ~ 17723597 (+)
LOC110511937 LOC106579397 coding downstream 496705 17858276 ~ 17938416 (+)
LOC110511872 LOC106605517 coding downstream 624436 17986007 ~ 18011922 (+)
G229870 NA non-coding upstream 9976 17351161 ~ 17351374 (+)
G229868 NA non-coding upstream 12604 17348369 ~ 17348746 (+)
G229778 NA non-coding upstream 169441 17191699 ~ 17191909 (+)
G229776 NA non-coding upstream 170333 17190805 ~ 17191017 (+)
G230105 NA non-coding downstream 117316 17478887 ~ 17479161 (+)
G230138 NA non-coding downstream 157055 17518626 ~ 17518928 (+)
G230246 NA non-coding downstream 346647 17708218 ~ 17708896 (+)
G230288 NA non-coding downstream 421362 17782933 ~ 17785805 (+)
G230378 NA non-coding downstream 552804 17914375 ~ 17915901 (+)
LOC110503770 LOC106605493 other upstream 713766 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 845457 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1664706 15672260 ~ 15697397 (+)
G227606 NA other upstream 2117068 15243946 ~ 15244282 (+)
G230916 NA other downstream 933783 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1208438 18569698 ~ 18588248 (+)
G231438 NA other downstream 1489678 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 1864795 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 2465559 19821356 ~ 19844652 (+)

Expression


Co-expression Network