G230378


Basic Information

Item Value
gene id G230378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17914375 ~ 17915901 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU263449
accaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggattatggcttggggatataagctgttcagggtcctgctggttccagacttggtgcatcggtactgcttgccgtgcggtagcagagagaacagtctatgacttgggtggctggagtctttgacagtttttagggcctttctcttacaccgcctggtatagtggTCCTGGAAGGCAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263449 True 226 lncRNA 0.51 2 17914375 17915901

Neighbor

gene id symbol gene type direction distance location
LOC110511951 LOC106605515 coding upstream 190778 17719737 ~ 17723597 (+)
LOC110503753 LOC106579405 coding upstream 196920 17484208 ~ 17717455 (+)
LOC110511964 LOC106605506 coding upstream 437784 17462963 ~ 17476591 (+)
LOC110505127 NA coding upstream 554805 17356774 ~ 17359570 (+)
LOC110503758 LOC106605505 coding upstream 573225 17222582 ~ 17341150 (+)
LOC110511872 LOC106605517 coding downstream 70106 17986007 ~ 18011922 (+)
trnar-acg-3 NA coding downstream 133077 18048978 ~ 18049050 (+)
LOC110511835 LOC106579338 coding downstream 244752 18160653 ~ 18163990 (+)
LOC118944496 LOC106579030 coding downstream 259532 18175433 ~ 18178854 (+)
LOC110511795 rwdd1 coding downstream 272712 18188613 ~ 18197679 (+)
G230288 NA non-coding upstream 128570 17782933 ~ 17785805 (+)
G230246 NA non-coding upstream 205479 17708218 ~ 17708896 (+)
G230138 NA non-coding upstream 395447 17518626 ~ 17518928 (+)
G230105 NA non-coding upstream 435214 17478887 ~ 17479161 (+)
G229874 NA non-coding upstream 552804 17361350 ~ 17361571 (+)
G230381 NA non-coding downstream 1030 17916931 ~ 17917402 (+)
LOC110511937 LOC106579397 non-coding downstream 18355 17858276 ~ 17938416 (+)
G230312 NA non-coding downstream 24633 17940534 ~ 17942259 (+)
G230401 NA non-coding downstream 48071 17963972 ~ 17964378 (+)
G230402 NA non-coding downstream 48705 17964606 ~ 17964850 (+)
LOC100653482 mrap2 other upstream 1115443 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 1266791 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 1398482 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 2217731 15672260 ~ 15697397 (+)
G227606 NA other upstream 2670093 15243946 ~ 15244282 (+)
G230916 NA other downstream 379453 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 654108 18569698 ~ 18588248 (+)
G231438 NA other downstream 935348 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 1310465 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 1911229 19821356 ~ 19844652 (+)

Expression


Co-expression Network