G230312


Basic Information

Item Value
gene id G230312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 17940534 ~ 17942259 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU263380
actttactgcaaaCAACAAGTCTTGGGAAAAAACAATAcaatattgcagttagccatgacagcctttataatagaacacttgtgacctcacacacacagctaaataatgcactttaaaaaataaaaaaaacatcttcacgtagaaatagaatgaaacaaacaggcattctattttcactctattatagtggccactatagtaGACATTGATCAAGTGCACAAGGTTACACACTTGCAAAAATAATGTTCACTGAGTAAAAATGTTAATAAtcccccctcactcacacacaagtgTTACTGTCAAATTCAACACAACATAAGCTAAATCTTTGGGCTACACTGCACATTATTACAAGTGTACACTTTAagcctgtggacatctgttctacaatgtgccagcagagcatgataccctttgttggcataattgatctctttcaggcagagagtACACCTGGCACACCCCTTTTTATCCACTGTATTGAAAAAGTGAGAAATagggaaagtgtgtggtgttcctttcacctctatagtGGCATCCAGTTTAAGCCAGACCCAGGTACACTTGATCGCTGAATGCACTTGTTTAACAAGCAACACCTCATTTtcacctaattctctcattctgaaaatgAACCACATGCTGTAGAGGGAAAACCTTAGTTCACAGATAGTAGTTTGTTCGTTAGCTAGTcaacatttcacacagattgccagggtccagtaagcaacaaACGCGTTATAACTTGAACGGCAAGGAGTCGTATACGAGTTAGTATTATAGCGAATTGGTTAGGTGAACGTTACTAACgttagctcatctgatgttgtCTGACTTTAGTAGCCAGCTAATTTTCACACCATAAACACAATTATTTGATCAGTTAAGTTGGcaaatgttgctcaacatttctctggctagctaacggGAGAATTCGATCCAGATAGTAAGATACTTAACAATGCCAATACTTGTTCCAtcacactttctccctcacctcaaacttcccaaataacagctgtttttctgttacagctcatgaagtacgCTTCATCACCTTATCACCCCCatctccgtggtcaggcttctcacctaacGTTGCCTCTTCTTTATCGTCCAGGGGATGCGCTGCTGTAACTAACAAACTGCCTTTCTACTCTCCGCGGTCTTTCCGGGGCGTGCGTGCTGATGCTGTCACTAGCAGGTTggttgtctctcctctcttcagtcGCGTGCTGCATTCTGTTGTTTTGTGAACGATTGGCTGATCCTTGTATACAGCCAGTATTGTTCCAAACTCGCATCACTCATTCGCCTACAGCCAGTAGTCAAGGCTTTTACCCATATGCCAGAATCACCTAGCTAATACAGTATgttcaaatatttacaaaatgcaGTATGCAAGAAAACACACCAAGAACTTCTAAGTTTCGGTAACAGACGTGACCAATCTACACACTCTCCAGCTCAGTTCTGTCTCCTCAGTGGAAGCGTAGCCTTCCCTCAGCCTCAAACAGCTTCTCTTCCTCTTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263380 True 1534 lncRNA 0.41 2 17940534 17942259

Neighbor

gene id symbol gene type direction distance location
LOC110511937 LOC106579397 coding upstream 3104 17858276 ~ 17938416 (+)
LOC110511951 LOC106605515 coding upstream 216937 17719737 ~ 17723597 (+)
LOC110503753 LOC106579405 coding upstream 223079 17484208 ~ 17717455 (+)
LOC110511964 LOC106605506 coding upstream 463943 17462963 ~ 17476591 (+)
LOC110505127 NA coding upstream 580964 17356774 ~ 17359570 (+)
LOC110511872 LOC106605517 coding downstream 43748 17986007 ~ 18011922 (+)
trnar-acg-3 NA coding downstream 106719 18048978 ~ 18049050 (+)
LOC110511835 LOC106579338 coding downstream 218394 18160653 ~ 18163990 (+)
LOC118944496 LOC106579030 coding downstream 233174 18175433 ~ 18178854 (+)
LOC110511795 rwdd1 coding downstream 246354 18188613 ~ 18197679 (+)
G230381 NA non-coding upstream 23132 17916931 ~ 17917402 (+)
G230378 NA non-coding upstream 24633 17914375 ~ 17915901 (+)
G230288 NA non-coding upstream 154729 17782933 ~ 17785805 (+)
G230246 NA non-coding upstream 231638 17708218 ~ 17708896 (+)
G230401 NA non-coding downstream 21713 17963972 ~ 17964378 (+)
G230402 NA non-coding downstream 22347 17964606 ~ 17964850 (+)
G230421 NA non-coding downstream 48152 17990411 ~ 17990691 (+)
G230422 NA non-coding downstream 48513 17990772 ~ 17990999 (+)
G230425 NA non-coding downstream 52597 17994856 ~ 17995076 (+)
LOC100653482 mrap2 other upstream 1141602 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 1292950 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 1424641 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 2243890 15672260 ~ 15697397 (+)
G227606 NA other upstream 2696252 15243946 ~ 15244282 (+)
G230916 NA other downstream 353095 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 627750 18569698 ~ 18588248 (+)
G231438 NA other downstream 908990 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 1284107 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 1884871 19821356 ~ 19844652 (+)

Expression


Co-expression Network