G230411


Basic Information

Item Value
gene id G230411
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18002682 ~ 18003074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU263485
ttctcatttacaactgcgacctggcctagataaagcaaagcagtgcggcaAAAACAACgacagagttaaacatggaataaacaaacgtacagtcaataacacaatagaaaaaatctatatacagtgtgtgcaaatgaggaaaGATTAGGGGGGTACGGCAatgaataggccatagtggcgaagtaattgtcatgacttccgccgaagtcggtccctctccttgttcgtgcggtgttcggcggtcgacgtcaccgaccttctagccatcgctgatccatttttcattttccattggttttgtcttgtcttccatcacacctggttccaatcccatcaattacatgttgtgtatttaacactctgttccccctcatgtccttttcggtgattgtt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263485 True 393 lncRNA 0.44 1 18002682 18003074

Neighbor

gene id symbol gene type direction distance location
LOC110511937 LOC106579397 coding upstream 65252 17858276 ~ 17938416 (+)
LOC110511951 LOC106605515 coding upstream 279085 17719737 ~ 17723597 (+)
LOC110503753 LOC106579405 coding upstream 285227 17484208 ~ 17717455 (+)
LOC110511964 LOC106605506 coding upstream 526091 17462963 ~ 17476591 (+)
LOC110505127 NA coding upstream 643112 17356774 ~ 17359570 (+)
trnar-acg-3 NA coding downstream 45904 18048978 ~ 18049050 (+)
LOC110511835 LOC106579338 coding downstream 157579 18160653 ~ 18163990 (+)
LOC118944496 LOC106579030 coding downstream 172359 18175433 ~ 18178854 (+)
LOC110511795 rwdd1 coding downstream 185539 18188613 ~ 18197679 (+)
LOC110511763 LOC106605526 coding downstream 216525 18219599 ~ 18230637 (+)
G230425 NA non-coding upstream 7606 17994856 ~ 17995076 (+)
G230422 NA non-coding upstream 11683 17990772 ~ 17990999 (+)
G230421 NA non-coding upstream 11991 17990411 ~ 17990691 (+)
G230402 NA non-coding upstream 37832 17964606 ~ 17964850 (+)
G230401 NA non-coding upstream 38304 17963972 ~ 17964378 (+)
G230413 NA non-coding downstream 9043 18012117 ~ 18012409 (+)
G230414 NA non-coding downstream 11436 18014510 ~ 18015258 (+)
G230804 NA non-coding downstream 119855 18122929 ~ 18123734 (+)
G230820 lars2 non-coding downstream 142547 18145621 ~ 18148461 (+)
G230929 NA non-coding downstream 157172 18160246 ~ 18160484 (+)
LOC100653482 mrap2 other upstream 1203750 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 1355098 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 1486789 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 2306038 15672260 ~ 15697397 (+)
G227606 NA other upstream 2758400 15243946 ~ 15244282 (+)
G230916 NA other downstream 292280 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 566935 18569698 ~ 18588248 (+)
G231438 NA other downstream 848175 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 1223292 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 1824056 19821356 ~ 19844652 (+)

Expression


Co-expression Network