G230940


Basic Information

Item Value
gene id G230940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18184157 ~ 18184391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU264088
cgctgtcatcaaggcaaagggtgtctacattgaagaatctaacatctattttgatttgtttaacacttttttgtgtactacatgattccatatgtgttatttcatagtttgaagaatgtagaaaatagtaaaaaattaagaaaaacccttgaatgagtaggtgtgcccaaacgtttgactggtactctgtgtGATTCACTGGAGTATCTGATAATCTATTGTCTGTCAAAGAAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264088 True 235 lncRNA 0.34 1 18184157 18184391

Neighbor

gene id symbol gene type direction distance location
LOC118944496 LOC106579030 coding upstream 5303 18175433 ~ 18178854 (+)
LOC110511835 LOC106579338 coding upstream 20167 18160653 ~ 18163990 (+)
trnar-acg-3 NA coding upstream 135107 18048978 ~ 18049050 (+)
LOC110511872 LOC106605517 coding upstream 172235 17986007 ~ 18011922 (+)
LOC110511937 LOC106579397 coding upstream 246727 17858276 ~ 17938416 (+)
LOC110511795 rwdd1 coding downstream 4222 18188613 ~ 18197679 (+)
LOC110511763 LOC106605526 coding downstream 35208 18219599 ~ 18230637 (+)
LOC110511665 LOC106579269 coding downstream 158936 18343327 ~ 18348845 (+)
LOC110511644 hint3 coding downstream 165234 18349625 ~ 18353319 (+)
LOC110511603 LOC106579246 coding downstream 174687 18359078 ~ 18386819 (+)
G230939 NA non-coding upstream 8 18183941 ~ 18184149 (+)
G230938 NA non-coding upstream 220 18183702 ~ 18183937 (+)
G230936 LOC106579331 non-coding upstream 2587 18180558 ~ 18181570 (+)
G230929 NA non-coding upstream 23673 18160246 ~ 18160484 (+)
G230946 NA non-coding downstream 11035 18195426 ~ 18195779 (+)
G230952 NA non-coding downstream 23932 18208323 ~ 18208550 (+)
G230954 cf113 non-coding downstream 33632 18218023 ~ 18219107 (+)
G230984 NA non-coding downstream 91096 18275487 ~ 18275884 (+)
G230926 NA non-coding downstream 107854 18292245 ~ 18292476 (+)
LOC100653482 mrap2 other upstream 1385225 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 1536573 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 1668264 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 2487513 15672260 ~ 15697397 (+)
G227606 NA other upstream 2939875 15243946 ~ 15244282 (+)
G230916 NA other downstream 110963 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 385618 18569698 ~ 18588248 (+)
G231438 NA other downstream 666858 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 1041975 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 1642739 19821356 ~ 19844652 (+)

Expression


Co-expression Network