G230984


Basic Information

Item Value
gene id G230984
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18275487 ~ 18275884 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU264141
CTTCTAGAACATGGATTGTTTAGAATGGCTtccagaaaatgttttgtttagAATGGCTTCCAGAACATGTTTTGTTTAGAACAGCTtttgaacatgttttttttagAATGGCTTCTAGAACATGTTTTGTTTAGAATGGCTTCTAGAACATGGATTGTTTAGAATGGCTTCTAGAACATGTTATGTTTAGAACAGCTtttgaacATGTTTTGTTTAGAACAGCTTTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264141 True 231 lncRNA 0.32 2 18275487 18275884

Neighbor

gene id symbol gene type direction distance location
LOC110511763 LOC106605526 coding upstream 44850 18219599 ~ 18230637 (+)
LOC110511795 rwdd1 coding upstream 77808 18188613 ~ 18197679 (+)
LOC118944496 LOC106579030 coding upstream 96633 18175433 ~ 18178854 (+)
LOC110511835 LOC106579338 coding upstream 111497 18160653 ~ 18163990 (+)
trnar-acg-3 NA coding upstream 226437 18048978 ~ 18049050 (+)
LOC110511665 LOC106579269 coding downstream 67443 18343327 ~ 18348845 (+)
LOC110511644 hint3 coding downstream 73741 18349625 ~ 18353319 (+)
LOC110511603 LOC106579246 coding downstream 83194 18359078 ~ 18386819 (+)
LOC110511593 LOC106579240 coding downstream 293814 18569698 ~ 18588248 (+)
LOC110511568 rn146 coding downstream 312815 18588699 ~ 18601905 (+)
G230954 cf113 non-coding upstream 56380 18218023 ~ 18219107 (+)
G230952 NA non-coding upstream 66937 18208323 ~ 18208550 (+)
G230946 NA non-coding upstream 79708 18195426 ~ 18195779 (+)
G230940 NA non-coding upstream 91096 18184157 ~ 18184391 (+)
G230939 NA non-coding upstream 91338 18183941 ~ 18184149 (+)
G230926 NA non-coding downstream 16361 18292245 ~ 18292476 (+)
G230994 NA non-coding downstream 21091 18296975 ~ 18297278 (+)
G230995 NA non-coding downstream 21438 18297322 ~ 18298246 (+)
G230912 NA non-coding downstream 22434 18298318 ~ 18305060 (+)
G230997 NA non-coding downstream 29590 18305474 ~ 18305714 (+)
LOC100653482 mrap2 other upstream 1476555 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 1627903 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 1759594 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 2578843 15672260 ~ 15697397 (+)
G227606 NA other upstream 3031205 15243946 ~ 15244282 (+)
G230916 NA other downstream 19470 18295354 ~ 18296105 (+)
G231438 NA other downstream 575365 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 950482 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 1551246 19821356 ~ 19844652 (+)

Expression


Co-expression Network