G230912


Basic Information

Item Value
gene id G230912
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18298318 ~ 18305060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU264055
TGACCCCACTCAGGTCATCATACAATCATATTGATGTTCAATATCACACACACTTTTCTGTTATGTTACAAGTAATTTCACCCTTCTTCTTCATCATACCATCTATAAACCTGCAGCCACTTCTGTTTTTCCATGACAACGTCTTTGTAGTGCACTTAATTAGGGAAGTCcatgaaaaaaatgtatacacGTTTTGCTAAAATAGTAAAGACTCACCATAATGCTGAAGAAAAGAGTGTTTCCATGTGCCGAACTGCAATTTTTGCTGCTCTTTGTTTTTGTGAAACACTTCTTTATGTCTTGAAGTCAGGGATGGTATTGGGAAACACTTGTTCTTTATATATTGGCGTGGTGGATATTGGTTAACACTTGACAATGTTCTTTCTAAAGCATCCCAGACAAAAAAGATTCAGAAAACATATAGTGCGTCAAACCAGTTTTATTTTCTCTATCAAGTAGACATTTGTATGTGAatgagagagaaattgagagagagagagacattgagagagagaaaggaggaacgTGAGGGGGGAAGAAAgattcagaaagagagagagagagagcgagagagagaggcagagtgttGAGGCTATATCAGATGCCAAGAACTCACAGGGTTTCTGGAATGTTTTGCTTAGAGGGAAAGAAACAAGAAAAGTTACCAGTTAATGTCAGGAAAAAGGCTAAACAAAGCCAGACTCCACTGATGGGATCTCATACAAGCTAAACAATATAGAACTGTCTTATAACGGTGGTGATGAAAAGAGGTGCTCTCAGTCCTTCTTGAGATGGGCCACTTCATGGAGGTACGCGATGAACAACTTGGTCCCCTCTATGTAGTTGTACCTGGGAAAGGACTGCTCATCTTCTCGTTCTGGGAGTGGAGGCCATCGTCGAAGCCTCCGATGGGCATCATGATGATGCTCTTACCGGTCACGTCCTCAAAGGTCTTGGCGATGGGGATGGTTCCCCCTTCACGGATCAGGTCTGGCTCCACGTTAAACACTCTTCACGGCTGCTTTCCCTGCCTCGTACAGAGGGTGCTTGGTGTCTGCTAACCAGGGCTTAGCCCCGATGATCATGGTCACCTTCAACTTGTTGGGGCTCTTTCTCTTGGCAAACACAGAGTTCAGGTAGTCTGTACCTGTTTCTTGACCACTGCTGGGTCCATGTTGGGGACCTGTCGAATGGAGAACTTGGCAATGACCTTAGCAGGGATGACCGTCTTGGAGCCAGGGCCAGAGAAGCCCCCCTCGATGCCATGGATGGTAACAGTAGGGTAACGCCAACGATGGGCCAGCAGATCACCTTGTTGCTGTACATTAGTTGACTGACACCGATCTTGGACTTAAAGCTCTCAATGTCAAACTCAATGTCCTGGTACATCTTCCACTCTTCGTCTGAGAGTGGGGCAACGGCCTCTCTGATGCCTGGAATGAGGATCTTTCCACTGGGGCTGATCAGTGTGTCAATATGCCAATCAGATCTGTCATAGGCTCTATAACAGTGCCTCCATACACCCCTGAGTGTAGGTCCTGTTTTGGGCCCTCTACCTACCAAACATACAAAGTCACCATGGCTATTCATTAATGATCTTGAAAAAGTAACGTTCCACAGAATTGGAAATGCCCCCAGTCCGTCCTACCTCAGCAAAGAAGTAGCAGTTTCCCCTGGTCCCGTAGGTGAGAGCGGGGCGTCGGCTCAGCCAACCACAGTCTGAGATGATGATGTATTCGACGTCGGAGAAGAACGTGTCTTTCTGCGCCACGATCATGGCGTCCAGGCCATTGGACCCGGTCTCCTCCATCCCCTCGATGATGAACTTCACATTGACTGGCAGGTCCTGCATGGGGAGAGGgcagggggtggagaggaggagaggaaggggaaggaggAGTGGAAAAAAATAAGAATTATTATAACAAAGGAAAGCTCCCTAATAACGGTCAGTTAGACTGCAACTTAACTTGTTTCACCACATCTTGTCTCTACATCTCCTATGAGTTCACTCTGATATCTCTTCTTACTGAACACTCACAATGCTGAGGGCCTGATAGGCCTCCACTGTATGGATCCAGGCTAAGACAGGGGCCTTGTTGTCAGACGCCCCTCTGCCGTAGAGGTTTCCTTAGAGGTAGAATCAAAGTAATTATTTTCAAATAAATGTCCATTATGTTCAGCTCACATTGACATTTAACATGCATGTATCAGTTACATTTCATTGGTTCAAAATATGTATGGTAAAAATCATCCCACACCCAAGTACTTGCTTCATTCCTTCACGTTAGTTACAATATCTAATGGCTGTTAGTTGTAGATAGATGTTTCTATGCGTTGGGTTGAGAATGGATTActgtaaagcactgtaaaaaaataattataatatattTGATTGCTGTGACTGTGAATGCCTGGAATCCATAGTTTACAGTTGGAACCCGTAACCTATCCTTGGAACATAGCCTACTGTTGCAACCCATAGCCTACCCTTGAAACATAGCATACTGTTGCAACCCATAGCCTACTGTTGGAACCCATAGCCTACCCTTGAAACATAGCCTACTGTTGCAACCCATAACCTACCGTTGGAtaccatagactactgttggataccatagactactgttggatacCATAGACTACCGTTGGATACCATAGACTACCGTTGGAtaccatagactactgttggataccatagactactgttggataccatagactactgttggataccatagactactgttggataccatagactactgttggataccatagactactgttggataccatagactactgttggataccatagactactgttggaAGCCATAGCCTACCGTTGATGTCGGTCAGGTTGTAGGGTTCAGTGGCCCAGCCGTCCTCTAGCTTAGCGGGCTGGACATCCACATGTCCGTACACACAGACTGTCTGCTTACTGGGGTCACTGCCAAACTGGGCTGTCACCACCTTGGGTAAGGCCACTGTCTTGCCATCAGGCAGCTAAGCATGATGATAAAAGACACGGTAGATGCAGAAAATGACCTGAATACAGTTTGCAAGGCAGGGAGCATTTCTGTTAACACCCAACTTTTAGTATTTATTTCTGCAAACCAGTCTGATCTGCTACCAAAGGACTTTAAAGACTAAGCTAAAAGCAAACAAAAAGATCCCATAACATAATCATTAAGTTGACCACATTTCAGAAAACTGACCTCTTGTACGCCGATGTCCACCAGTTCCACCTTCCCTCCCATGGCTTGTAGTTTCTCAGCCGTCATATCCATCATGCGATGGCAGTCTGGCCTCCTCAAGACATCACTGGAATCGCTCTCTACAGCAACCCAGTCCCTCaGCCTGTACATATTCCTCCTGATGGCTGTCAACATATTGGCTCAGCTCATCATACTCAAATAAGTGATGAGGATGAGTAGAGACACTTGATATAACAACAAGGAGCATGGAAGGCAGTTGCCAGATCGTCATCTC
>TU264057
TGACCCCACTCAGGTCATCATACAATCATATTGATGTTCAATATCACACACACTTTTCTGTTATGTTACAAGTAATTTCACCCTTCTTCTTCATCATACCATCTATAAACCTGCAGCCACTTCTGTTTTTCCATGACAACGTCTTTGTAGTGCACTTAATTAGGGAAGTCcatgaaaaaaatgtatacacGTTTTGCTAAAATAGTAAAGACTCACCATAATGCTGAAGAAAAGAGTGTTTCCATGTGCCGAACTGCAATTTTTGCTGCTCTTTGTTTTTGTGAAACACTTCTTTATGTCTTGAAGTCAGGGATGGTATTGGGAAACACTTGTTCTTTATATATTGGCGTGGTGGATATTGGTTAACACTTGACAATGTTCTTTCTAAAGCATCCCAGACAAAAAAGATTCAGAAAACATATAGTGCGTCAAACCAGTTTTATTTTCTCTATCAAGTAGACATTTGTATGTGAatgagagagaaattgagagagagagagacattgagagagagaaaggaggaacgTGAGGGGGGAAGAAAgattcagaaagagagagagagagagcgagagagagaggcagagtgttGAGGCTATATCAGATGCCAAGAACTCACAGGGTTTCTGGAATGTTTTGCTTAGAGGGAAAGAAACAAGAAAAGTTACCAGTTAATGTCAGGAAAAAGGCTAAACAAAGCCAGACTCCACTGATGGGATCTCATACAAGCTAAACAATATAGAACTGTCTTATAACGGTGGTGATGAAAAGAGGTGCTCTCAGTCCTTCTTGAGATGGGCCACTTCATGGAGGTACGCGATGAACAACTTGGTCCCCTCTATGTAGTTGTACCTGGGAAAGGACTGCTCATCTTCTCGTTCTGGGAGTGGAGGCCATCGTCGAAGCCTCCGATGGGCATCATGATGATGCTCTTACCGGTCACGTCCTCAAAGGTCTTGGCGATGGGGATGGTTCCCCCTTCACGGATCAGGTCTGGCTCCACGTTAAACACTCTCTCTTCACGGCTGCTTTCCCTGCCTCGTACAGAGGGTGCTTGGTGTCTGCTAACCAGGGCTTAGCCCCGATGATCATGGTCACCTTCAACTTGTTGGGGCTCTTTCTCTTGGCAAACACAGAGTTCAGGTAGTCTGTAACCTACAACAGAACAAATATGTAACATTCATACATACAGTCTTCATGTCTATTTCATTAACTGAAACCAAAACTGAAATAGTCAATAACTGAAtagtaactgaactgaatgagcAGAATGAGGTACATTATAATAGTGTAACCTGGATGAATGTTCCCTTTTCTTGGATGTATTGTATAAAGAGAGTCTGAAGGTTATAACAATTCCAGAAATGTGTGTAACTGTGTATAACTGCATGTACACTGTAATTGTGTTGTCATGCAACTGTACAATGGACTGGGTGAGAGGTGTGTACCACCTACCTGTTTCTTGACCACTGCTGGGTCCATGTTGGGGACCTGTCGAATGGAGAACTTGGCAATGACCTTAGCAGGGATGACCGTCTTGGAGCCAGGGCCAGAGAAGCCCCCCTCGATGCCATGGATGGTAACAGTAGGGTAACGCCAACGATGGGCCAGCAGATCTACCTGAGAAATCAAATGAAA

Function

NR:

description
cytosolic non-specific dipeptidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264055 False 3495 lncRNA 0.45 7 18298318 18305060
TU264057 True 1635 lncRNA 0.43 3 18298318 18300591

Neighbor

gene id symbol gene type direction distance location
LOC110511763 LOC106605526 coding upstream 67681 18219599 ~ 18230637 (+)
LOC110511795 rwdd1 coding upstream 100639 18188613 ~ 18197679 (+)
LOC118944496 LOC106579030 coding upstream 119464 18175433 ~ 18178854 (+)
LOC110511835 LOC106579338 coding upstream 134328 18160653 ~ 18163990 (+)
trnar-acg-3 NA coding upstream 249268 18048978 ~ 18049050 (+)
LOC110511665 LOC106579269 coding downstream 38267 18343327 ~ 18348845 (+)
LOC110511644 hint3 coding downstream 44565 18349625 ~ 18353319 (+)
LOC110511603 LOC106579246 coding downstream 54018 18359078 ~ 18386819 (+)
LOC110511593 LOC106579240 coding downstream 264638 18569698 ~ 18588248 (+)
LOC110511568 rn146 coding downstream 283639 18588699 ~ 18601905 (+)
G230995 NA non-coding upstream 72 18297322 ~ 18298246 (+)
G230994 NA non-coding upstream 1040 18296975 ~ 18297278 (+)
G230926 NA non-coding upstream 5842 18292245 ~ 18292476 (+)
G230984 NA non-coding upstream 22434 18275487 ~ 18275884 (+)
G230954 cf113 non-coding upstream 79211 18218023 ~ 18219107 (+)
G230997 NA non-coding downstream 414 18305474 ~ 18305714 (+)
G231277 NA non-coding downstream 224003 18529063 ~ 18529365 (+)
G231279 NA non-coding downstream 232570 18537630 ~ 18537829 (+)
G231288 NA non-coding downstream 243468 18548528 ~ 18548758 (+)
G230916 NA other upstream 2213 18295354 ~ 18296105 (+)
LOC100653482 mrap2 other upstream 1499386 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 1650734 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 1782425 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 2601674 15672260 ~ 15697397 (+)
G231438 NA other downstream 546189 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 921306 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 1522070 19821356 ~ 19844652 (+)
G233521 LOC106579937 other downstream 2253716 20558776 ~ 20565712 (+)

Expression


Co-expression Network